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Detailed information on CNT30439786


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697318Aegilops tauschiiOryza sativa32.3935.492.98114forward
CNT30676942Aegilops tauschiiSetaria viridis32.3923.4194.74114forward
CNT30524376Aegilops tauschiiSetaria italica32.3919.1394.74114forward
CNT30297243Aegilops tauschiiTriticum aestivum84.66100100298forward
CNT30223766Aegilops tauschiiHordeum vulgare71.0251.5596.8250forward
CNT30390938Aegilops tauschiiTriticum turgidum70.1747.0594.74247forward
CNT30555270Aegilops tauschiiOryza glaberrima31.5323.9794.59111forward
CNT30662749Aegilops tauschiiTriticum dicoccoides79.83101.4495.02281forward
CNT304300Aegilops tauschiiZea mays30.1116.4393.4106forward
CNT30721254Aegilops tauschiiTriticum spelta71.0244.8894.8250forward
CNT30117872Aegilops tauschiiOryza nivara31.5334.5895.5111forward

Expression of CNT30439786

Peptides detected in this lncRNA

>peptide 1 (32 aa)
QVSSKKIKNQAQAEAVVRYSHQKSERSCFFCP*

>peptide 2 (89 aa)
MFLLPLIIYTYGTFVLSYFSPVKFTQHMMLHRAHRTQLIHQQPTAADGQSTASSQAGHPLGGAGDDGEQVDGDAVAEVVEGVAVKEKGAS

Sequence

>CNT30439786
CAAGTTTCCAGCAAGAAAATAAAAAATCAAGCACAAGCTGAAGCAGTGGTCCGATACTCCCATCAGAAATCAGAACGATCATGTTTCTTCTGCCCTTGAT
AATTTACACGTACGGCACATTCGTACTCTCATACTTTTCCCCGGTAAAATTCACACAGCACATGATGCTGCATCGCGCGCATCGCACGCAGCTGATCCAT
CAACAGCCGACGGCGGCGGACGGGCAATCAACGGCCAGCTCACAGGCTGGGCACCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGGTTGATGGGGATG
CTGTTGCCGAAGTAGTTGAGGGTGTTGCCGTCAAGGAGAAGGGCGCCAGTCT