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Detailed information on CNT30439575

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30185187	Aegilops tauschii	Secale cereale	100	39.86	99.72	1410	reverse complement
CNT30299935	Aegilops tauschii	Triticum aestivum	99.5	63.95	99.71	1403	reverse complement
CNT30223648	Aegilops tauschii	Hordeum vulgare	100	59.37	95.96	1410	reverse complement
CNT30387090	Aegilops tauschii	Triticum turgidum	100	50.11	99.79	1410	reverse complement
CNT30242786	Aegilops tauschii	Avena sativa	61.7	100.46	98.74	870	reverse complement
CNT30670388	Aegilops tauschii	Triticum dicoccoides	100	50.29	99.29	1410	reverse complement
CNT3017956	Aegilops tauschii	Zea mays	100.43	40.15	97.53	1416	reverse complement
CNT30688988	Aegilops tauschii	Triticum urartu	62.62	45.42	99.89	883	reverse complement
CNT30721631	Aegilops tauschii	Triticum spelta	100	40.6	99.65	1410	reverse complement

Expression of CNT30439575

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MKTLVPLSLAATNGVSVDFPSFSYSDVSVR*

>peptide 2 (31 aa)
GFLVTHVSILTSDISRSCHQKPSLIDRTSRY*

>peptide 3 (41 aa)
MFQFAKFEKSKERRLATELGYGFPIGDPWITEKSLPMAFRL*

>peptide 4 (76 aa)
MGTNEQGYHLLWPDLPIFLENQFTARPTPSSVLCCLCLRPKTVADFVQLRRARYGNFSNYACCLLVFPSSNPQQIE*

Sequence

>CNT30439575
CAGGATTTCTCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGTCTTGTCACCAAAAACCTTCCCTGATTGACAGAACGTCCCGCTACTGACA
CTTGAAAAAGCTGCTTTCAAGGTCTCGTCGCTTCGGTGAATCACTTGAGCCCTGAGACATTTTCGGTGCCATGGAGCTAGACCAGTGAGCTATTACGCTT
TCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATC
TGGGCTGTTTCCCTCTCGACTTTGGATCTTAGCACCCAATCAGTCTGTCTGTACTAAGGATGACGGCCTGTATTCGGAGTTTCCCTGGGGTTGGTAAAGC
GAAATGGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGAT
CTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCT
CATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACGTAAATCTTCCACCTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTGTTCCCATTT
CCTCGCTGACCCATCATGCGAAAGGTACGCCGTTAGAGTGAGTGCGCCCGCGCTCCGCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATT
GCACTCCCCGATTGGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTC
GCGTAAAAGCGATCATCATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGGAACGAATGAACAGGGCTATCACCTTCTTTGGCCGGATCTT
CCAATCTTTTTAGAAAACCAGTTCACTGCGCGCCCCACCCCGTCATCAGTCCTGTGTTGCCTATGCTTGCGCCCCAAAACGGTTGCTGACTTTGTACAAC
TCCGTAGGGCGCGCTACGGCAACTTTTCTAACTACGCTTGCTGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACCGCTTCGGATT
TCTTTTGATGAAAACCCTTGTTCCGCTCTCGCTCGCCGCTACTAACGGGGTCTCGGTTGATTTTCCTTCCTTTAGCTACTCAGATGTTTCAGTTCGCTAA
GTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGAAAAATCTCTCCCCATGGCCTTT
CGCCTCTGAA