Detailed information on CNT30439245


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3091836Aegilops tauschiiSolanum tuberosum36.133.4889.999forward
CNT30224045Aegilops tauschiiHordeum vulgare50.7337.3799.28139forward
CNT30463939Aegilops tauschiiSaccharum spontaneum93.819.9894.94257forward
CNT30655387Aegilops tauschiiRosa chinensis34.6713.9186.3295reverse complement
CNT30689350Aegilops tauschiiTriticum urartu41.247.2299.12113forward
CNT30103440Aegilops tauschiiOryza rufipogon72.2612.2297.98198forward
CNT30556528Aegilops tauschiiPanicum hallii93.824.8594.55257forward

Expression of CNT30439245

Peptides detected in this lncRNA

>peptide 1 (32 aa)
ILTFFTSVTTFSHFFFDLMTFYAIGKRMKSER*

Sequence

>CNT30439245
AGATATTGACTTTTTTTACATCTGTAACTACATTCTCACATTTCTTTTTTGATCTCATGACTTTTTATGCGATCGGAAAACGAATGAAATCAGAAAGATA
GGCGGACGACTTGACCATAAGGTCGGATGTTTCCGTGAGCAGTAAGCAGCGGATCTCCCCTTTTTGGGGGAAAGCTGGTGGCCCTTTTGGCATGTTAATT
CTTTCGACGGGGCGGCCTTCTTCGTTCGGTAGATCCGGTCGAGGTGGTTTTCGTTTACCAGCGCGTAGGTGGTC