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Detailed information on CNT30439186


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30185681Aegilops tauschiiSecale cereale18.2234.0889.26242forward
CNT30297106Aegilops tauschiiTriticum aestivum70.8689.799.36941reverse complement
CNT30142095Aegilops tauschiiLolium perenne6.442.2989.4185reverse complement

Expression of CNT30439186

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MIIICKLDNRTASAGGQQHQYFLMHYRFPN*

>peptide 2 (53 aa)
MGGGYLLLGSMSPSRWPWWRGDGVGVCVRGQRRRWCFPSAYANPRSVGGCGAR*

Sequence

>CNT30439186
TCCTATGGACCGGGTAGGCTAGAGATTAACGGTAGTTGATCTTTTCTTATTGATCTGTCTATGCGTCTGTGAAGTGAGGACAGAGAGATGGGAGGAGGAT
ACCTTCTCCTTGGCTCGATGAGCCCGAGCCGGTGGCCATGGTGGAGGGGCGACGGCGTGGGCGTGTGTGTGCGTGGGCAGCGGCGGAGGTGGTGCTTCCC
GTCGGCCTACGCTAACCCTAGATCGGTGGGGGGCTGCGGTGCACGATGAACCTCGTACCGTGTGCATCACCCCCCCCCCCCCCCCCCCCCCACCTCTTTA
TGTAGCCCGGCGACAGGGGCCCACCAACCAGAGTTCGGTTGGGCGCCCCCGATCAGGGCGCGAGTCAAGGGCCCGTCGAACCGTTGGGCTCGCGGATCTT
CCCCCACAGCAAGACAACACAAGTTTTTTAAAAGTTCTTTAAATATCCAAGTATTGATCTCAAATGGTGTATTGAATTTGTTTCCATTGACTGGCAGAAA
CTTTAGGCATGTTTGCAATTGGACAAATGGTGTATAACAATGATCATCATCTGTAAATTGGACAATCGGACAGCATCAGCAGGAGGACAGCAACATCAAT
ATTTTCTCATGCATTACAGGTTTCCCAATTGATCATTACACTGCAGTAATTTCTTCTGATGCCAATTGTAAACAGACCAAAGATAAGCAAGCATGGCCAT
GTGTAAGTTGTTCAACCTGTTCCTCTGATCTGTTGGAAATCTTGTCCATACACAATCAGTGACTGAAAACTGTACACCTATGGGAAATTTTGCTCTAATT
GTACACTGGATTACCATGGATTACTCAATTCCCAACACTTTACACTGTTAGTTTGACAAACTTCTTTAAATACCTTGCCAGTCCAACTACTCCTGTGATC
TGTCAATTATTGCCAATCCAGCTTCGAGATGCACACAACTAACTGAGTTTTTTTGATCTGACAAACAGCAGCAGCAGAGGGTAGTAGCCAACAGTAGGAG
CAGGGCGGGGACTCGATCGGGCAGGCAGCAGCGGCAGCAGTAGCAGAGGTCTGCGTGGTCCTGATGAATGAAGCCAACAGTAAGAAAAGCCAACAGTCTT
GACAGCAAATAAGAATGAAAATTGTGAATGACAGATTAGTCTTGTCATGATTACACCTCAGGAGTATCAGGTTTAATTTGATGACTTTTCCAAACTCCTC
TTCCAAACTATACTTATAGATCCATCTAGGGCAAGGTGGCAAGATTTCTCCATGTGATTTTGTGACAACAATGTCCACATGCTTTTAATACTGGAAAAAA
AGAGATATCTCAATCCAATGGGAATATG