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Detailed information on CNT30439146


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677121Aegilops tauschiiSetaria viridis18.8520.6590.2482forward
CNT30297024Aegilops tauschiiTriticum aestivum10099.7799.54435forward
CNT30257614Aegilops tauschiiAvena sativa95.494.7584.1415forward
CNT30136185Aegilops tauschiiLolium perenne102.9967.9885.71448forward
CNT30352984Aegilops tauschiiEragrostis tef41.3830.7786.11180forward
CNT30103845Aegilops tauschiiOryza rufipogon28.2827.5882.93123forward
CNT30578311Aegilops tauschiiOryza barthii28.0527.2381.97122forward

Expression of CNT30439146

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MLPLCKKRLKQSTSSMFFKSRLSSFPLEASHMPASDQDPSEAYPSHPSEAYPSRPSEVDPPYQAEQARREGVIERTC

Sequence

>CNT30439146
CAGTCTTCCACCTCTCATTCTTCAGCTGGAACCTAATCTCATCCTCATCCTACCCGATCATAATATATAGCAACCAGTAAATTTACTCTACCTCGGCTAG
AGATATTGCTCGCCAAAATTGCCCCGGTACCAAAAGAATATTAACTGAAACAACCAATAGCCCAAATCAATCTACAACTTGAAAGATACCTTTGGGATCC
TCATGCTCCCTCTGTGTAAAAAAAGACTGAAACAATCGACATCATCTATGTTCTTCAAAAGCCGACTCAGTAGTTTCCCATTGGAGGCATCCCATATGCC
GGCATCGGACCAGGACCCATCGGAGGCATACCCATCCCACCCATCGGAGGCATACCCATCCCGCCCATCGGAGGTGGACCCCCCATACCAGGCGGAGCAG
GCAAGGCGAGAGGGAGTAATTGAGCGTACATGTTC