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Detailed information on CNT30439068


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629525Aegilops tauschiiVigna unguiculata41.3552.7988.55227forward
CNT3015866Aegilops tauschiiZea mays41.5331.7591.67228forward
CNT30228831Aegilops tauschiiAnanas comosus33.1557.9690.11182forward
CNT30651330Aegilops tauschiiRosa chinensis66.1282.3182.92363forward
CNT30684845Aegilops tauschiiTriticum urartu64.8521.7392.42356forward
CNT30480841Aegilops tauschiiArabidopsis halleri33.729.7988.65185forward
CNT30368387Aegilops tauschiiSorghum bicolor41.7126.5491.7229forward
CNT30420297Aegilops tauschiiPapaver somniferum41.3534.2487.22227forward
CNT30176038Aegilops tauschiiVigna angularis33.746.4885.95185forward
CNT30113122Aegilops tauschiiFicus carica41.5327.4786.84228forward

Expression of CNT30439068

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MMMTWEVKLAASLAGSSLELDATNPRFRSFTATFLTLKPTLSPGSASRRDSWCISTDL

>peptide 2 (56 aa)
MAALVTLAPVGSFFSTPLMTPTATVCLMSRTAKRPRGGCGSPALGRSRCQSDQGGS*

>peptide 3 (41 aa)
QVSPKLTLGQYVKGTRQTPPRARYAALTAEQLKYTQYEQCP*

>peptide 4 (29 aa)
PGFTEAYIRTVCKRHKTDTTKGTICSTNS*

Sequence

>CNT30439068
CCAGGTTTCACCGAAGCTTACATTAGGACAGTATGTAAAAGGCACAAGACAGACACCACCAAGGGCACGATATGCAGCACTAACAGCTGAACAGCTAAAA
TATACCCAGTACGAACAATGCCCTTAACAAAACTCAGCCAATACTAAAAACTGCTTGGTGTCTGAAACAGTGATTTGGATATCAATTGTGGAATTACTTC
TTCTTGATGGCAGCCTTGGTCACCTTGGCCCCGGTTGGGTCCTTCTTCTCAACGCCCTTGATGACACCAACAGCCACAGTCTGCCTCATGTCACGGACAG
CAAAACGACCAAGAGGAGGGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCAATCTGACCAGGGTGGTTCATGATGATGACCTGGGAGGTGAAGTTG
GCTGCCTCCTTGGCAGGGTCATCCTTGGAGTTGGATGCAACAAACCCACGCTTCAGATCCTTCACGGCAACGTTCTTGACGTTGAAGCCAACGTTGTCAC
CAGGAAGCGCCTCCAGGAGAGACTCATGGTGCATCTCAACGGACTTGAC