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Detailed information on CNT30438855


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697771Aegilops tauschiiOryza sativa28.2547.3585.53152forward
CNT30183781Aegilops tauschiiSecale cereale88.4869.6997.48476forward
CNT30296412Aegilops tauschiiTriticum aestivum83.64100.4598.22450forward
CNT30391100Aegilops tauschiiTriticum turgidum100.3788.8297.96540forward
CNT30662804Aegilops tauschiiTriticum dicoccoides100.3798.997.96540forward
CNT30104515Aegilops tauschiiOryza rufipogon28.2530.7784.87152forward
CNT30118046Aegilops tauschiiOryza nivara28.2538.8785.53152forward

Expression of CNT30438855

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MFTGGNTNTEECTPKMSSLFITQAIQMVPVFHLSFFSWNLISSSSYPIIIYSNQ*

>peptide 2 (69 aa)
MLPLCKKRLKQSTSSMFFKSRLSSFPLEASHMPASDQDPSEAYPSRPSEVDPPYQAEQARREGVIERTCS

Sequence

>CNT30438855
TCTGAACACAAAGTGTAACATATAACATACAAGCAGTGTTATGTTCACGGGTGGCAACACCAACACGGAGGAGTGTACACCCAAAATGTCTAGTCTTTTT
ATCACACAAGCTATACAAATGGTACCAGTCTTCCACCTCTCATTCTTCAGCTGGAACCTAATCTCATCCTCATCCTACCCGATCATAATATATAGCAACC
AGTAAATTTACTCTACCTCGGCTAGAGATATTGCTCGCCAAAATTGCCCCGGTACCAAAAGAATATTAACTGAAACAACCAATAGCCCAAATCAATCTAC
AACTTGAAAGATACCTTTGGGATCCTCATGCTCCCTCTGTGTAAAAAAAGACTGAAACAATCGACATCATCTATGTTCTTCAAAAGCCGACTCAGTAGTT
TCCCATTGGAGGCATCCCATATGCCGGCATCGGACCAGGACCCATCGGAGGCATACCCATCCCGCCCATCGGAGGTGGACCCCCCATACCAGGCGGAGCA
GGCAAGGCGAGAGGGAGTAATTGAGCGTACATGTTCTG