Detailed information on CNT30438827


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30279704Aegilops tauschiiChenopodium quinoa23.8811.169580reverse complement
CNT30200883Aegilops tauschiiPisum sativum99.723.0293.71334forward
CNT30212621Aegilops tauschiiHelianthus annuus99.719.1393.71334forward
CNT30571978Aegilops tauschiiVitis vinifera99.77.2595.51334forward
CNT30575988Aegilops tauschiiOryza barthii51.0412.0799.42171forward

Expression of CNT30438827

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MPESQHQGLTQIERRRPLRDIVPIPVLNYRRLVS*

Sequence

>CNT30438827
CAATTTGTTTTTCAATTAGAAGTGGTTCATATTGTGGTTGGTTGGGCACTTCTGTAAGCCTTGCACCTCTATTGAGTAATGCCTGAGTCGCAGCATCAAG
GTCTGACCCAAATTGAGCGAAGGCGGCCACTTCGCGATATTGTGCCAATTCCAGTTTTGAACTACCGCAGACTTGTTTCATAGCTTTCAACTGAGCGGCA
GACCCGACGCGACTGACGGATAAGCCAACGTTAATAGCTGGTCTAATTCCGCGATAAAAGAGCTCTGTTTCCAAACAGATTTGTCCATCTGTAATGGAGA
TCACATTGGTGGGGATATAGGCCGATACGTCTCCA