Detailed information on CNT30438506


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30389102Aegilops tauschiiTriticum turgidum42.7686.7396.72183forward
CNT30682481Aegilops tauschiiTriticum urartu56.0741.4594.58240forward

Expression of CNT30438506

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MINDLAAAAGAAAAGAALALGAAAAAASSAARHLRGCLGLDGGFDWC*

>peptide 2 (71 aa)
AETRRVAPAASASGYMLQPPQPLPHLQALPQPQLPPQQDIFEVAWDWMEALIGVGLFCASCLLAALHGSRW*

>peptide 3 (68 aa)
GRDEEGGAGGLSLRVHVAAAAAVAALAGAAAAAASSAARHLRGCLGLDGGLDWCWTLLCFLLAGSVTW*

>peptide 4 (51 aa)
WQRRGGWRRRPQPPGTCCSRRSRCRTCRRCRSRSFLRSKTSSRLLGIGWRP*

Sequence

>CNT30438506
TGGCAGAGACGAGGAGGGTGGCGCCGGCGGCCTCAGCCTCCGGGTACATGTTGCAGCCGCCGCAGCCGTTGCCGCACTTGCAGGCGCTGCCGCAGCCGCA
GCTTCCTCCGCAGCAAGACATCTTCGAGGTTGCTTGGGATTGGATGGAGGCCTTGATTGGTGTTGGACTCTTTTGTGCTTCTTGCTTGCTGGCAGCGTTA
CATGGTAGTAGATGGTAGATAGATCATAGATATGATGCACGCGGCGCATGCATGATCAATGATCTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCG
CACTTGCACTGGGCGCTGCCGCAGCCGCAGCTTCCTCCGCAGCAAGACATCTTCGAGGTTGCTTGGGATTGGATGGAGGCTTTGATTGGTGTTGACTAGG
AGCTTCCTGTGTGCTTCTTGCTTGCTGG