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Detailed information on CNT3043845

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30715353	Prunus dulcis	Malus domestica golden	37.3	15.05	87.03	185	forward
CNT30704989	Prunus dulcis	Prunus avium	60.28	39.29	96.32	299	forward
CNT30115231	Prunus dulcis	Eutrema salsugineum	14.92	20.05	91.89	74	forward

Expression of CNT3043845

Peptides detected in this lncRNA

>peptide 1 (30 aa)
KPSQDTITSFLRSLLCRTRVLKANFVSSSP*

>peptide 2 (86 aa)
MRAKVRAPSPFPTCAFSYSLLSVRLLICCFCFVAWAVEEEAHEEVEEEAPKDETEIQVVLPLSTINRRRLSPDPHVLFSNQVISTD*

Sequence

>CNT3043845
CAAACCCTCTCAAGATACGATAACTTCTTTTCTCCGCAGCCTTCTTTGCAGAACTAGGGTTTTGAAAGCGAACTTCGTTTCATCGTCACCATGAGAGCCA
AGGTAAGAGCTCCATCTCCTTTCCCTACTTGCGCTTTCTCTTATTCTTTGTTATCTGTTCGTTTATTGATTTGTTGTTTTTGTTTTGTGGCGTGGGCAGT
GGAAGAAGAAGCGCATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCCAAGTAGTTTTGCCGCTATCCACCATCAATCGACGTCGTCTC
TCACCCGATCCCCATGTTTTGTTTTCTAATCAAGTAATCAGTACCGATTAGTCAGCTTGTAGTCGTTGTGTACTTTTGTGATTCTCTCAGTTTGAACAAT
TTTTGCTTAATTTCAGTCAGCTTTCAAACCATATTATGAGCTTTAAAATAACTGATTTTCTATCTGAGCCTCGGTATCGCGATTTTAAATTCTGAT