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Detailed information on CNT30438197


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 1e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670969Aegilops tauschiiSetaria viridis97.0489.0499.81016reverse complement
CNT30641383Aegilops tauschiiNymphaea colorata97.2332.5996.661018forward
CNT30550219Aegilops tauschiiIpomoea triloba97.5223.5198.821021forward
CNT30702366Aegilops tauschiiQuercus lobata95.1310098.29996reverse complement
CNT30378673Aegilops tauschiiArabidopsis thaliana31.8126.797.3333reverse complement
CNT30283003Aegilops tauschiiChenopodium quinoa57.6963.2598.01604reverse complement
CNT3020470Aegilops tauschiiCitrullus lanatus32.2862.7198.52338reverse complement
CNT30632407Aegilops tauschiiVigna unguiculata97.0437.6298.331016reverse complement
CNT30504586Aegilops tauschiiNicotiana attenuata97.1357.7597.841017forward
CNT30569655Aegilops tauschiiActinidia chinensis97.828.7697.561024forward
CNT30147396Aegilops tauschiiMedicago truncatula97.5234.3298.141021forward
CNT30660235Aegilops tauschiiTriticum dicoccoides72.4980.6698.81759reverse complement
CNT30140161Aegilops tauschiiLolium perenne99.1430.4999.811038forward
CNT30605146Aegilops tauschiiGossypium raimondii72.5949.7798.03760reverse complement
CNT30216563Aegilops tauschiiKalanchoe fedtschenkoi97.5226.2598.731021forward
CNT30655407Aegilops tauschiiRosa chinensis97.3330.4897.841019forward
CNT30628241Aegilops tauschiiDaucus carota97.5237.8198.821021reverse complement
CNT30682011Aegilops tauschiiTriticum urartu93.1210099.9975forward
CNT30346087Aegilops tauschiiEragrostis tef40.5941.1100425forward
CNT30429739Aegilops tauschiiPapaver somniferum97.6131.7794.231022forward
CNT30571858Aegilops tauschiiVitis vinifera97.5229.4698.731021reverse complement
CNT3056076Aegilops tauschiiAmborella trichopoda87.339.792.67914forward
CNT3038324Aegilops tauschiiCucumis melo97.6154.1997.851022reverse complement

Expression of CNT30438197

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQP*

Sequence

>CNT30438197
GTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAG
GTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTG
AAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGT
GGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGGCGGGACACTGCGAGGTGGG
TAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCC
TGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCC
GGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAG
GGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGC
GAGGAGCCAGCCCTAGTACGAGAGGACTGGGCTGGGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAG
AACTGCTGCGCCGCGGGAAATCCTTCTCTATACAAGTTCTCGTACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTAAGCACCGCGAGGTGTGA
AGCGATCTCGTACTAAACGAATGGAAATTGACAACAATAAAAAAAAC