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Detailed information on CNT30437845


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30452760Aegilops tauschiiSaccharum spontaneum22.0633.2188.0492forward
CNT30687482Aegilops tauschiiTriticum urartu50.8412.2890.09212reverse complement

Expression of CNT30437845

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MANPSGSSIQGKGKDYCESLTLTDPEDSTMVSDMFRLRISVQIKRIIPSLRTLK*

>peptide 2 (82 aa)
MGDGPLSPALYKEVGDGGSHYEVRRDAVHPTYIPYRSRVSAVLMGSAATTSPTICHHHRRHSPWPTHRAHQSKEKVKTTVNP*

Sequence

>CNT30437845
AACGGCCCACCGGGCCCTTAGATCCGCGCCCTGATCGGGGGCGCTCAGCCCATTATGGGTGACGGGCCCCTGTCACCTGCACTATATAAAGAGGTGGGGG
ACGGCGGCTCGCATTATGAGGTTCGTCGCGATGCCGTACACCCCACCTACATCCCCTACCGATCTAGGGTTAGTGCGGTGCTGATGGGAAGCGCCGCCAC
CACTTCTCCCACGATCTGCCATCACCACCGCCGCCATTCACCATGGCCAACCCATCGGGCTCATCAATCCAAGGAAAAGGTAAAGACTACTGTGAATCCT
TAACCCTAACCGATCCAGAGGACTCAACAATGGTATCAGACATGTTTCGGTTGAGGATTTCGGTGCAAATCAAAAGAATCATCCCCTCCCTTAGAACCCT
AAAGTGACAGGGCAAAG