Detailed information on CNT30437365


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672859Aegilops tauschiiSetaria viridis22.3834.5390.9177forward
CNT30521306Aegilops tauschiiSetaria italica36.3415.5188.8125forward
CNT30221053Aegilops tauschiiHordeum vulgare69.7733.4395240forward
CNT30657835Aegilops tauschiiTriticum dicoccoides48.8460.2297.62168forward
CNT30351340Aegilops tauschiiEragrostis tef19.192387.8866reverse complement
CNT30597191Aegilops tauschiiOryza meridionalis39.2446.5587.41135forward
CNT30104481Aegilops tauschiiOryza rufipogon40.9917.4986.52141forward

Expression of CNT30437365

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MHLILPPLLTLLRPALPERRLTGRPAVDLSPWKGATVVAEEAITAGAMAEYVNC*

>peptide 2 (34 aa)
LYYSTEFNIRNTILNQSHLRDGQNCYTYKYDDVP*

Sequence

>CNT30437365
TATTATATTATTCAACAGAGTTTAACATAAGAAATACGATTTTAAATCAAAGCCATCTTCGAGATGGACAAAATTGTTACACCTACAAATACGATGATGT
GCCTTGACCACACCATCCATCGCAAAAATAATAATTAGTTTTCATACCTGCATGCATCTGATCCTTCCGCCATTGCTGACGCTGCTGAGGCCGGCGCTGC
CGGAGCGGCGGCTGACGGGGAGGCCCGCGGTCGACTTGAGCCCCTGGAAGGGCGCGACGGTGGTGGCGGAAGAAGCCATCACGGCTGGGGCCATGGCGGA
GTACGTAAATTGCTAGGTGGGGAGGCGATAGCTAGCTTGGCTAC