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Detailed information on CNT30437323


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692160Aegilops tauschiiOryza sativa43.7590.3288.99336reverse complement
CNT30200508Aegilops tauschiiPisum sativum7.5526.0189.6658forward
CNT30219845Aegilops tauschiiHordeum vulgare14.1952.4100109reverse complement
CNT30599240Aegilops tauschiiFraxinus excelsior30.9957.3582.77238reverse complement
CNT30368658Aegilops tauschiiSorghum bicolor77.08100.1791.72592reverse complement
CNT30369364Aegilops tauschiiOryza glumipatula12.6323.3297.9497reverse complement
CNT30103784Aegilops tauschiiOryza rufipogon44.6672.8295.04343reverse complement

Expression of CNT30437323

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MDNHLLPMGELLLISNLDNWICTKGDHKFHIP*

Sequence

>CNT30437323
GTTGGGTAATCATTCGATTAAGTCTTAAATGAGCCCCTCTAAAGTTTGAGGCAAATGAACGCATTTTTGTTCGTCGTCTCCGGGCTATATATCCTCGCGG
AACTCTGGTCATTGAATCAAATTAACCTTAATGAATAACTAATGATTTCTCTTCTTTTAGCCACCCTTTTTCTCATTAATAACAAACCTAATTATTCCGA
TATATAAAATATTAATTCCAATGGCTTTTGCTATAGTAACCTTCCCAACCACGATTTTTTATTCCACTCCGTTCAGTTATTTCTATACGAAATAACAAAT
TCATTCTAATAATACTAAAAAAAATAGTGGGTTCCATCGTTTCTATGGTTCCCTTTTAAACGGTGAGGCCCTCTCTATACACCGGAGCCCTTTCTTTCAT
CAAAAGGTATTGCGAACTTGTATAGTCCACATTCTTTGGCTCTACCTATCCATTATAGAGTAAATAGCTCTTTTCACAATAAGAGTTATCCATACAGTGA
CGGTATTTAATTATGAAAGTTGGCTAAGTAGCTGACCCTGTTAGTCCGTTCTTTTAAGATAAAGGAGCATAAGCCTTTTTCTTTTTATTACTATTTCCTC
CGCTTAATGGATAACCATTTGCTACCAATGGGAGAATTGCTTCTTATTTCCAATTTAGATAATTGGATTTGCACCAAAGGAGACCATAAATTCCATATAC
CATAGAAATCTAGGATAGAGAAGCTATATCCTATTCATTGGTACTAATCATGGATACTTCAATTTTTT