Detailed information on CNT30437317


BLAST search results

BLAST vs Swiss-Prot:
sp|P07398|RBS3_WHEAT, E-value = 5e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30356658Aegilops tauschiiLactuca sativa405.4787.7890forward

Expression of CNT30437317

Peptides detected in this lncRNA

>peptide 1 (30 aa)
FLTSSTSLSTCVASVHPNIGNFHFVRYQPS*

>peptide 2 (74 aa)
LLDLLHLLEHLCGVSAPEHRQLPLCPVSAIIVPGGVIVLTEDEADLAELEAGHPLGADQVVDLLEEGLHGEGWQV

Sequence

>CNT30437317
CTTCTTGACCTCCTCCACCTCCTTGAGCACCTGTGTGGCGTCAGTGCACCCGAACATAGGCAACTTCCACTTTGTCCGGTATCAGCCATCATAGTACCCG
GGGGAGTTATTGTGCTCACGGAAGACGAAGCCGACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGTAGTCGACCTGCTTGAGGAGGG
CCTCCATGGAGAGGGGTGGCAAGTG