Detailed information on CNT30437294


BLAST search results

BLAST vs Swiss-Prot:
sp|P32112|SAHH_WHEAT, E-value = 2e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221157Aegilops tauschiiHordeum vulgare40.9354.7699.13115forward
CNT30681317Aegilops tauschiiTriticum urartu42.724.4995120forward
CNT30354796Aegilops tauschiiLactuca sativa34.5218.4482.4797forward

Expression of CNT30437294

Peptides detected in this lncRNA

>peptide 1 (92 aa)
AGAPADLGAEGGEGLDEHGGLDGHVEGAGDPGALEGLRGAELGAAGHEAGHLDLGEVLDLVLPARRGLLHGERHGEGWWIGSGRGGGGRGVMG

>peptide 2 (90 aa)
QEHQRTSAPRAVRVSMSTAVWMVMWREPEIRAPLKGCEGPNSVRQAMRPGISTSARSLTLYSRPDEVFSTESAMEKVGGLDLAEEEEEEE*

Sequence

>CNT30437294
GCAGGAGCACCAGCGGACCTCGGCGCCGAGGGCGGTGAGGGTCTCGATGAGCACGGCGGTCTGGATGGTCATGTGGAGGGAGCCGGAGATCCGGGCGCCC
TTGAAGGGCTGCGAGGGGCCGAACTCGGTGCGGCAGGCCATGAGGCCGGGCATCTCGACCTCGGCGAGGTCCTTGACCTTGTACTCCCGGCCCGACGAGG
TCTTCTCCACGGAGAGCGCCATGGAGAAGGTTGGTGGATTGGATCTGGCAGAGGAGGAGGAGGAAGAGGAGTGATGGGAGG