Detailed information on CNT30436848


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9AQU5|PIP13_MAIZE, E-value = 5e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3013604Aegilops tauschiiZea mays35.037.5292.23103forward
CNT30680173Aegilops tauschiiTriticum urartu82.65100100243forward
CNT30320106Aegilops tauschiiAsparagus officinalis33.335.4985.7198forward
CNT30120512Aegilops tauschiiCitrus clementina29.2528.7684.8886forward
CNT3039904Aegilops tauschiiMarchantia polymorpha38.446.7183.19113forward

Expression of CNT30436848

Peptides detected in this lncRNA

>peptide 1 (42 aa)
KFNMGKSRAAVMGWYSRERGSPWRSSWRRWRRRRCRRGRRCR*

>peptide 2 (35 aa)
EIQHGEEQSGGDGMVLTGTWESLAFLLASVAEKTV*

Sequence

>CNT30436848
GGAAATTCAACATGGGGAAGAGCAGAGCGGCGGTGATGGGATGGTACTCACGGGAACGTGGGAGTCCCTGGCGTTCCTCTTGGCGTCGGTGGCGGAGAAG
ACGGTGTAGACGAGGACGAAGGTGCCGATGATCTCGGCGCCGAGGCCGGAGCCCTTGGTGTAGCCGGGCGCCACCACGTTGGCGCCGCCGCCGTTGCCCA
TGCACTGCATGATGATGTAGAACACCGCCCGGGTCAGCGACAGCTTCCTCGCCAGGAACAGCCCGAAGGTCACCGCCGGGTTGATGTGCCCGCC