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Detailed information on CNT30436767


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 3e-93

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30181095Aegilops tauschiiSecale cereale74.9336.2596.96559forward
CNT30288382Aegilops tauschiiTriticum aestivum89.5461.8595.66668forward
CNT30221752Aegilops tauschiiHordeum vulgare88.6198.893.8661forward
CNT30387937Aegilops tauschiiTriticum turgidum10065.6195.58746forward
CNT30658325Aegilops tauschiiTriticum dicoccoides80.4383.197.5600forward
CNT30681645Aegilops tauschiiTriticum urartu70.9136.1696.6529forward

Expression of CNT30436767

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLHNLCSYKHRSYRMKNMLWSESRVVDKSEVHKRPSYIGHCFNS*

Sequence

>CNT30436767
TCCACCAACTAGCTGTGAGACATATCCATAGCAGTGCCAAATAAACAAAGTTTTCCGAGAATTAACAGCAGGACAATGGTCCGCTTGTTGTATATAATAA
ATATCACACTGGTGTTGTATATGTGTAGCCGGTGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAACATAGATCATACAGAATGAAAA
ATATGCTCTGGTCGGAAAGCAGAGTCGTGGACAAAAGTGAAGTTCACAAAAGACCTTCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGCCA
GACTCCTCGCAACCCGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTACT
CCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCATCGTAGTACCC
GGGGGAGCTGTTGTGCTCACGGAAAACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAAGTAGTCGACCTGCTTTAGGAGG
GCCTCCGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAATAGATGGAATGAACACAATTGATCAAC
ACTTGGTGCTTAAAGAAAGACCTGGCCATAAGGCAAAAATTACTCC