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Detailed information on CNT3043670


BLAST search results

BLAST vs Swiss-Prot:
sp|P93822|ERF97_ARATH, E-value = 8e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30591123Prunus dulcisMusa acuminata18.8124.1584.12170forward
CNT30437038Prunus dulcisAegilops tauschii19.1422.5380.92173forward

Expression of CNT3043670

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MRSRSRCGSHRVGQGARISAATEHRRWACLPERHRKPCRRRREKDDEEGGGGYC*

>peptide 2 (91 aa)
MMRREAVVIVDVVIRGGGGGREVGLGLGPAERSGCGIVGSSRVLRRVESSEPDPSLFPGVSDLGGESAPRPLPHAAEPDFLGPRGLGFGIA*

>peptide 3 (37 aa)
IYFFFFYNDFPEKIRADRKKTKEERKKWGGPLWRSIR*

Sequence

>CNT3043670
GATTTACTTCTTTTTTTTTTATAATGATTTTCCCGAGAAAATAAGGGCAGACAGAAAAAAAACGAAAGAAGAAAGGAAAAAGTGGGGGGGACCATTATGG
AGATCCATACGGTAATTAGAGGCACAACGCGGTGGCTTGAAGATCATGATCATCACCACAAACCTCACCGGATTTGAATAAATCGAGGCCGTCCATCATC
GGGGGCGGCGGCAGGTTGAGATCGAACGGCAAAGGCGAGACTCTCCGAAACGACGACGTCAGGACGCAATCATCGCCGTCGTCTACGACGGAGGATGAGG
AGTCGCAGTCGCTGTGGCAGTCATCGGGTGGGACAGGGTGCACGGATCTCCGCTGCAACTGAGCATCGGAGGTGGGCCTGCTTGCCTGAACGACATCGCA
AACCGTGTCGTCGTCGTAGAGAGAAGGATGATGAGGAGGGAGGCGGTGGTTATTGTTGATGTCGTAATCCGCGGCGGAGGTGGGGGGAGGGAAGTTGGTC
TTGGCCTTGGGCCCGCGGAGAGATCGGGCTGCGGCATCGTAGGCTCGAGCCGCGTCCTCCGCCGAGTCGAAAGTTCCGAGCCAGACCCGAGTCTTTTTCC
AGGGGTCTCTGATCTCGGCGGCGAATCGGCCCCACGGCCGCTTCCGCACGCCGCGGAACCGGATTTCTTGGGCCCCCGTGGGCTTGGGTTTGGGATTGCA
TAATTGGGCTCCTGCTCCTCCTGCGGCTGCTGCTGCTGCTGCGGTGGCTCTGCCTCCTCGCCGCATGGGAAAAAGAAAACAAGAAAGAAAAAGAAAAAAG
AAGAAAAGGAGATGGTAGGTAGAGATGAAGATTGAAGAAGGGCCTGTGATGAGGGGGCTCTGTTTTCTCTCTCCTTCTTCTACCACCTCCTTGAGGGATT
GGGG