Detailed information on CNT30436660


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30288901Aegilops tauschiiTriticum aestivum76.3276.8190.86361forward
CNT30387206Aegilops tauschiiTriticum turgidum76.3264.790.86361forward

Expression of CNT30436660

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MAVTVLRRACSEDLEHAAGLLVDEPRDALHAAPPGQPPDRRLGDALDVVAEHLPVPLGAALAQPFAALAAPRHRRSG*

>peptide 2 (68 aa)
MSPEMRFTPPLLASLRIAGLVMPWMLSRSTFRCRLAPPLPSPLPPLPRPDIAAPVSSDRCVIGKKRECC

>peptide 3 (52 aa)
TEHKTRNTTTHAKAAVNPISHSTHHRGHKTDTAATTLLLPPTEPRNLAPPKP*

Sequence

>CNT30436660
TACTGAACACAAGACACGGAACACAACGACGCACGCCAAAGCAGCAGTAAATCCCATCTCCCACAGCACACATCACAGAGGGCACAAGACAGACACAGCC
GCAACCACACTGCTGCTGCCACCAACGGAACCCAGGAACCTAGCCCCGCCGAAGCCGTAGAGGGTGCGGCCCTGGCGCTTGAGCGCGTAGACGACGTCCA
TGGCGGTGACGGTCTTGCGGCGGGCGTGCTCGGAAGATCTTGAGCACGCCGCGGGTCTCCTCGTAGATGAGCCCCGAGATGCGCTTCACGCCGCCCCTCC
TGGCCAGCCTCCGGATCGCCGGCTTGGTGATGCCCTGGATGTTGTCGCGGAGCACCTTCCGGTGCCGCTTGGCGCCGCCCTTGCCCAGCCCTTTGCCGCC
CTTGCCGCGCCCCGACATCGCCGCTCCGGTTAGCTCCGACAGGTGTGTGATTGGGAAGAAGAGGGAGTGCTGC