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Detailed information on CNT30436541


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30288480Aegilops tauschiiTriticum aestivum68.6164.1697.07376forward

Expression of CNT30436541

Peptides detected in this lncRNA

>peptide 1 (63 aa)
VPGGVIVLTEDEADLAELEAGHPLGADQVVDLLQEGLRGEGWQVRQGLELLDALNRPHLNEWK*

>peptide 2 (85 aa)
MHLILPPLLTLPRLPLERRLTGRPAVDLSPWKGATVVADEAITAGAMVLYYRRRGGCRLQEGLRGEGWQVRQGLELLDALNRPHLN

Sequence

>CNT30436541
TAGTACCCGGGGGAGTTATTGTGCTCACGGAAGACGAAGCCGACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGTAGTCGACCTGCT
TCAGGAGGGCCTCCGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAATGAATGGAAATAATTATGG
AATGCACACAACTGCTTAACACTTGGTGCTAGTAAATTGTACGTACTGAGGAAGAAACTCATATAAGTTTTGTGCCTCGACATACCTGCATGCACCTGAT
CCTTCCGCCATTGCTGACGCTGCCGAGGCTGCCGCTGGAGCGGCGGCTGACGGGCAGACCGGCTGTGGACTTGAGCCCCTGGAAGGGTGCGACGGTGGTA
GCCGACGAAGCCATCACGGCGGGGGCCATGGTATTGTATTATCGGAGGAGAGGAGGATGCCGGCTACAGGAGGGCCTCCGTGGAGAGGGGTGGCAAGTAA
GACAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAATG