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Detailed information on CNT30436229


BLAST search results

BLAST vs Swiss-Prot:
sp|Q33439|COX1_EPHMA, E-value = 2e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549614Aegilops tauschiiIpomoea triloba30.3220.6994.76191forward
CNT30619215Aegilops tauschiiSesamum indicum26.6715.9495.83168forward
CNT30205015Aegilops tauschiiHelianthus annuus53.0281.4692.81334forward
CNT30485496Aegilops tauschiiChara braunii32.3815.2285.78204forward

Expression of CNT30436229

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MSSPEFARTIPVSPPMVNKKMNPTANNMGVLYCIEPPHMVAIQLKILIPVGTAMIMVAAVK*

Sequence

>CNT30436229
CAACCACATAATAAGTATCATGTAGAGCAATGTCTAGCCCAGAGTTTGCTAGAACTATTCCAGTGAGCCCTCCTATGGTGAACAAAAAGATGAACCCTAC
AGCAAATAACATGGGTGTTTTGTATTGTATCGAACCTCCCCACATGGTAGCGATCCAACTAAAGATTTTGATTCCTGTGGGCACAGCTATGATCATGGTA
GCTGCGGTGAAGTAGGCACGCGTATCAACGAATGCCCACAGTAAACATATGATGAGCCCAAACTAGAAATCCAAGAACACCTATACTTATCATGGCATAA
ACCATGCCTAGATACCCGAAGACCGGTTTTCTTGAAAAGGTCGATACGATATGACTAATAATACCAAATCCAGGCAGAATGAGAATATACACCTCTGGAT
GACCGAAGAACCAAAAGAGATGCTGGTATAATATTGGGTCTCCCCCTCCTGCAGGATCAAAAAAGGTTGTATTAAAGTTTCGATCGGTTAATAACATTGT
AATTGCCCCCGCCAGTACCGGAAGTGATAATAAAAGTAGGAATGCTGTCACTAGAACGGACCACACAAAAAGTGGTAATCTATGCATAGTCATTCCAGGT
CCACGCATGTTGAAGATAGTTGTTATAAAA