Detailed information on CNT30436158


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697529Aegilops tauschiiOryza sativa20.1314.5693.3360forward
CNT30180208Aegilops tauschiiSecale cereale34.5624.4797.09103forward
CNT30221417Aegilops tauschiiHordeum vulgare86.2442.5592.61257forward
CNT30385322Aegilops tauschiiTriticum turgidum64.4356.395.83192forward
CNT30252158Aegilops tauschiiAvena sativa55.0342.9391.46164forward
CNT30658022Aegilops tauschiiTriticum dicoccoides91.95101.4896.72274forward
CNT30137831Aegilops tauschiiLolium perenne69.848.2688.46208forward
CNT30680368Aegilops tauschiiTriticum urartu85.9197.3498.05256forward
CNT30349480Aegilops tauschiiEragrostis tef21.4826.1293.7564forward
CNT30104555Aegilops tauschiiOryza rufipogon20.138.2393.3360forward

Expression of CNT30436158

Peptides detected in this lncRNA

>peptide 1 (77 aa)
FCLARYSSKTLALADPAEAAVTAKTAARPRSADRRSLAGATCTRFAAAGEADCGTAAAGLRPTTLVFTPAMILSGFS*

>peptide 2 (96 aa)
LLLGEVLVEDACPGRPGGGGRDGEDRRQAEKRRPPVLGRGDLHALCRRRRGGLRHRRGGLEADHTGVHAGHDPLGVFLIDLVCVRARVWPQGRGAW*

Sequence

>CNT30436158
CTTCTGCTTGGCGAGGTACTCGTCGAAGACGCTTGCCCTGGCCGACCCGGCGGAGGCGGCCGTGACGGCGAAGACCGCCGCCAGGCCGAGAAGCGCCGAC
CGCCGGTCCTTGGCCGGGGCGACCTGCACGCGCTTTGCCGCCGCCGGCGAGGCGGACTGCGGCACCGCCGCGGCGGGCTTGAGGCCGACCACACTGGTGT
TCACGCCGGCCATGATCCTCTCGGGGTTTTCTTGATTGATCTGGTGTGTGTTCGTGCGCGTGTGTGGCCTCAGGGGAGGGGGGCGTGGTGATGGTTTT