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Detailed information on CNT30435910


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628366Aegilops tauschiiVigna unguiculata21.5812.0492.44172forward
CNT30587418Aegilops tauschiiMusa acuminata21.4622.5389.47171forward
CNT30659902Aegilops tauschiiTriticum dicoccoides21.254.8798.22169forward
CNT308389Aegilops tauschiiZea mays23.9687.6189.01191forward
CNT3041102Aegilops tauschiiChlamydomonas reinhardtii11.0422.6885.2388forward
CNT30720265Aegilops tauschiiTriticum spelta11.1732.7295.5189forward
CNT30365573Aegilops tauschiiSorghum bicolor11.7926.6393.6294forward
CNT30570586Aegilops tauschiiVitis vinifera20.0823.1982.5160forward
CNT30645006Aegilops tauschiiCannabis sativa26.625.7678.77212forward

Expression of CNT30435910

Peptides detected in this lncRNA

>peptide 1 (99 aa)
MLQEHQRTSAPRAVRVSMSTAVWMVMWREPEIRAPLKGCEGPNSVRQAMRPGISTSARSSSRRPKSAWERSSPRRAPWRRLVDWIWQRRRRKRSDGRRRR

>peptide 2 (34 aa)
MENGNQGRKYTLLLVTESLTLMAGKRRVPDSCIW*

Sequence

>CNT30435910
CCGGGCAAATCACATAATTCAGTGCATGGCACAGTAGTGTTTCATGCTCAAATGAGTGCAGTGAAATAATAATATTTGGTAGGCAGGTTACCCTATAATT
AGACCCTCCCAGGCCGTCAGATCCAGAAAACAATGCGACTAATGTTATCATTAGTTAGTCAACAACCAGAGTAACAAACACTAAACCCAAAGACAAAGAT
ACAGATCCAGGCCTAGTACTCCACCGCTGCTTCACCACGAAGCAGCATCTAAACTAGGCAACAACGAGATCTAGATGTTACAATATCAGATCTACAACAT
AAACATGTAAACTACTACAACAATACTACTACGCTCAAACAAGTAGAAACGGAGCATCAGATCTGAAATGGAAAATGGGAACCAGGGAAGGAAGTATACC
TTGCTCTTGGTGACGGAGTCGTTGACGTTGATGGCGGGGAAGAGGAGGGTGCCGGACTCCTGCATCTGGTAGAGCCTCTTGACGCCGGTGGTGAAGATGT
TGCAGGAGCACCAGCGGACCTCGGCGCCGAGGGCGGTGAGGGTCTCGATGAGCACGGCGGTCTGGATGGTCATGTGGAGGGAGCCGGAGATCCGGGCGCC
CTTGAAGGGCTGCGAGGGGCCGAACTCGGTGCGGCAGGCCATGAGGCCGGGCATCTCGACCTCGGCGAGGTCGAGCTCGAGGCGCCCGAAGTCGGCCTGG
GAGAGGTCTTCTCCACGGAGAGCGCCATGGAGAAGGTTGGTGGATTGGATCTGGCAGAGGAGGAGGAGGAAGAGGAGTGATGGGAGGAGGCGGCGAT