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Detailed information on CNT30435870


BLAST search results

BLAST vs Swiss-Prot:
sp|O49079|PSBO_FRIAG, E-value = 1e-138

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690150Aegilops tauschiiOryza sativa13.0957.3986.5163forward
CNT30574985Aegilops tauschiiOryza barthii13.0957.1986.5163forward

Expression of CNT30435870

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLPVEEDAFFTFSLANSSSSPLPPAGSATALS*

>peptide 2 (59 aa)
MSDCREQVILAPASTPNARATCDDGRAEEARPPILAGISVAAAWRDAAMLVGGLVRGRID

>peptide 3 (80 aa)
MSLVFWKAGGSFFWMPSAELLHLVLAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDLVEGQPLGRPLRARALHPRASL*

Sequence

>CNT30435870
TAGGCGAGGAAGAAACAATAACAGAAGCTAAAATATAAACCGACACCCTGGGTTTAGATTACTAGATACACACACAAACACACATTGTTGCCTCGATTGT
TTCCTCTCCACCGATCAACCCACGTACGCATGCACACAAGATGAGTATCTTCACTTCTGCTCTGCTCTAGTTAGACTCGAGCTGCGCGTACCACACACCC
TGGATCTTGACATCCTTGGGCGCCTTGGCGCCGAGGTCGGTGTCTGACGGCTGCACGCTCTCGAAGACGCCGATCACCTCGCCGGTCTCCGGCTTGCTCT
TGGTGACGCTGAGCGTGATGTTGCCCGTGGAGGAGGACGCGTTCTTCACGTTCTCCTTGGCCAACTCCTCCTCGTCTCCTCTGCCTCCGGCGGGTAGCGC
CACGGCGTTGTCGTAGCCAGTAGAGCCACCACGGCCCTTTGGGTCGAGGAAAGACGAACCCCTGTAGCTGGGCACGAGGAAGGGCCCGCTGAAGCTCTCG
GGCTTGCCGGTGGCGACGAGCTGCTTGACGGTGAAGAGGAAGGGCACGCGCTCGCCTCCGGGGAGCTGCACGGTGACGGCCGCGTAGTCGATGCCGTCCT
TCTCCTCGAACTTGAGGGTGCCGTCGGCGCCGACCTCGAGCGGGCCTTCCATCTCGTCAAGGGTGTAGGTGAGACGGGTCATGAGCTTGGTCTTCTGGAA
GGCCGGCGGCTCGTTCTTCTGGATGCCCTCGGCAGAACTTCTTCATCTCGTACTTGCCGGCCTTGAAGGGGAAGGAGTCGACGCCGCCGTCGATGGTCGG
GCACTGGTTCGCGGTGCCGGTACCCTTCACCTCCATGTAGGTCTTGCTCTGGATCTCGTCGAAGGTCAGCCTCTTGGGCGCCCCCTCCGCGCTCGCGCCC
TGCACCCACGCGCGTCACTCTAGCTAGCTGGACTGGACAGGAGTAAAAGGCCATGGACGGGAATAGAATGGATTAGTCAGCTTACGGAGACGAGGAGGGC
AGAGGTGGCGAGGGCGAAGCCGGCCATCTTGGCGGCGTCGGCGCACTTGCTTGCGACCTCCCTGATGTCGGACTGCAGGGAGCAGGTGATCCTGGCGCCA
GCGTCGACGCCGAACGCCCGGGCGACGTGCGACGACGGTCGCGCGGAGGAGGCCCGGCCGCCGATCTTGGCCGGCATCAGCGTGGCCGCGGCTTGGAGAG
ACGCTGCCATGTTGGTCGGTGGCTTGGTACGCGGGAGGATCGATC