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Detailed information on CNT30435788


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099667Aegilops tauschiiOryza rufipogon83.511.0398.42253forward

Expression of CNT30435788

Peptides detected in this lncRNA

>peptide 1 (57 aa)
VNRSRLAELLPFSFQSAPFSSSVGAFSLLIRVEVAREQSVPPCHSREDLNSRSRLLS*

Sequence

>CNT30435788
TGTGAACCGAAGTCGTCTTGCCGAACTCCTTCCTTTCTCATTTCAGTCCGCGCCTTTTTCATCTTCTGTAGGGGCCTTTAGTCTTTTGATTAGAGTGGAG
GTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGA
AAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAAC
CAT