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Detailed information on CNT30435581


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG86|RS271_HORVU, E-value = 6e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693384Aegilops tauschiiOryza sativa42.3242.495.28212forward
CNT30674820Aegilops tauschiiSetaria viridis42.324092.45212forward
CNT30523172Aegilops tauschiiSetaria italica42.3233.4991.98212forward
CNT30553804Aegilops tauschiiOryza glaberrima42.3235.1695.28212forward
CNT30656187Aegilops tauschiiTriticum dicoccoides91.8268.5598.7460forward
CNT30142281Aegilops tauschiiLolium perenne78.2450.9893.88392forward

Expression of CNT30435581

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSSVMVLPVRVFTKICILAAVGGRLRALRRRRRRRGR

Sequence

>CNT30435581
ACTCTCGATAGGTAGGTAGGTAAAAGAGCAGAGCAAACGCAAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTGCCGCAGTAGTG
GCGGTCGAAGTGGTTGGCCATGAAGGTGCCGGCGCCGCAGTCGGCGTTCGGGCACTCCTTCCTGAGCCTGGTGACCTTGCCGGTGGCGTCGTCGACCTTG
TAGAACTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTAC
CGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAGCGT
GATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGGCGGCGGTGGGAGGTCGCCTCCGCGCGCTGCGGCGGCGACGGCGGCGGCGGGGTAGG
G