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Detailed information on CNT30435425


BLAST search results

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 8e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30285916Aegilops tauschiiTriticum aestivum48.2848.2896.95295forward
CNT30246600Aegilops tauschiiAvena sativa29.1329.4797.19178forward
CNT30720143Aegilops tauschiiTriticum spelta48.7750100298forward

Expression of CNT30435425

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MPSLSWILALTLSMVSEDSTSSVMVLPVRVFTKICILAAVGGRLRALRRRRRRRGRVWVGGRSGG*

Sequence

>CNT30435425
TAGGCGATGAAATATTCAGGAAACATGATACTCAAGGATTCAGTTTAAACGACAAACGGGACACATCTAAATGAGTTCGACTCTCGATAGGTAGGTAGGT
AAAAGAGCAGAGCAAACGCAAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGGTCGAAGTGGTTGGCCAT
GAAGGTGCCGGCGCCGCAGTCGGCGTTCGGGCACTCCTTCCTGAGCCTGGTGACCTTGCCGGTGGCGTCGTCGACCTTGTAGAACTGGAGGACGGCGAGC
TTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGTAGGTCTTCTTCTTGCGCTTCTTGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC
TGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGGCGG
CGGTGGGAGGTCGCCTCCGCGCGCTGCGGCGGCGACGGCGGCGGCGGGGTAGGGTTTGGGTTGGGGGGCGGAGTGGAGGCTAGGGTTTGGGACGCCTGGA
GCAGTCTAGCT