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Detailed information on CNT30435418


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 4e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675375Aegilops tauschiiSetaria viridis38.3758.5197.58165forward
CNT30376827Aegilops tauschiiArabidopsis thaliana24.1944.0783.65104forward
CNT3090157Aegilops tauschiiSolanum tuberosum22.7915.1982.6598forward
CNT30125320Aegilops tauschiiPhyscomitrium patens22.7910.0785.7198forward
CNT30591253Aegilops tauschiiMusa acuminata28.639.4292.68123forward
CNT30508427Aegilops tauschiiSolanum lycopersicum19.323.9285.5483forward
CNT30240523Aegilops tauschiiAvena sativa39.0726.8497.02168forward
CNT30309861Aegilops tauschiiCamelina sativa24.1916.7781.73104forward
CNT30464179Aegilops tauschiiSaccharum spontaneum31.1627.4694.78134forward
CNT30686633Aegilops tauschiiTriticum urartu21.433.2110092reverse complement
CNT30720171Aegilops tauschiiTriticum spelta71.8647.9895.79309forward
CNT30154413Aegilops tauschiiPrunus persica24.1926.8786.54104forward
CNT3053477Aegilops tauschiiAmborella trichopoda21.8615.0284.0494forward

Expression of CNT30435418

Peptides detected in this lncRNA

>peptide 1 (35 aa)
ATQIQKLTPLHLQPSSKRSRPSRHGCGGRAGCPWA*

>peptide 2 (31 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSKSPTR*

Sequence

>CNT30435418
CGCAACACAGATTCAGAAGCTAACACCTCTACACCTCCAACCAAGCTCGAAGCGCTCTAGGCCCTCTCGCCACGGATGCGGCGGGCGAGCTGGATGTCCT
TGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCAAAGAGCCCGACGAGGTAGGCCTCGGCCGCCTCCTGCAGCGCGGAGAC
GGCGGAGCTCTGGAAGCGGAGCGCGACGGTGCCGGGGCGGAAGCGGTGGGGCTTCTTCACGCCGCCGGTGGCCGGCGCGGACTTGCGCGCCGCCTTGGTC
GCCAGCTGCTTCCGCGGCGCCTTGCCGCCGGTGGACTTCCTCGCCGTCTGCTTCGTGCGGGCCATCGGGACGAGAGGCTGGGGTGGGGTGGGGGAGTGCG
AGCTCTTGGGGGATCTGGGAATGGAGGATG