Detailed information on CNT30435385


BLAST search results

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 7e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518633Aegilops tauschiiJuglans regia47.8464.7289.53277forward
CNT30178164Aegilops tauschiiSecale cereale87.7475.1598.03508forward
CNT30605213Aegilops tauschiiGossypium raimondii47.1590.488.64273forward
CNT30571087Aegilops tauschiiVitis vinifera67.5358.9785.93391forward
CNT30580001Aegilops tauschiiEchinochloa crusgalli72.0257.1294.48417forward

Expression of CNT30435385

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSSVMVLPVRVFTKICILAAVGGRLRALRRRRRRRGRVWVGGRSGG*

Sequence

>CNT30435385
CACATCTAAATGAGTTCGACTCTCGATAGGTAGGTAGGTAAAAGAGCAGAGCAAACGCAAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCC
GCACTTGCCGCAGTAGTGGCGGTCGAAGTGGTTGGCCATGAAGGTGCCGGCGCCGCAGTCGGCGTTCGGGCACTCCTTCCTGAGCCTGGTGACCTTGCCG
GTGGCGTCGTCGACCTTGTAGAACTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGTAGGGTGGACTCCTTCTGG
ATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGG
CCTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGGCGGCGGTGGGAGG
TCGCCTCCGCGCGCTGCGGCGGCGACGGCGGCGGCGGGGTAGGGTTTGGGTTGGGGGGCGGAGTGGAGGCTAGGGTTTG