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Detailed information on CNT30435310


BLAST search results

BLAST vs Swiss-Prot:
sp|P02277|H2A3_WHEAT, E-value = 1e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30286315Aegilops tauschiiTriticum aestivum57.3843.9399.46373forward

Expression of CNT30435310

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MRPTGNWRPALTDLVTDFFLGPPNFFPATFFSLLASIFLACSLLAGTPARGGFGGVG*

>peptide 2 (48 aa)
TALDTRWIQKNRGSKTLPLRSGLHGGAKQKDKLQHSLEHTIANLTQRH*

>peptide 3 (42 aa)
HCIRHQMDSEEQRKQDASSSFRVTWWGKAKGQASTLSGTHHS*

>peptide 4 (35 aa)
MLGITPPWAMVTPLSSLPSSWYSRTAARYSRTAAR*

Sequence

>CNT30435310
ACACTGCATTAGACACCAGATGGATTCAGAAGAACAGAGGAAGCAAGACGCTTCCTCTTCGTTCAGGGTTACATGGTGGGGCAAAGCAAAAGGACAAGCT
TCAACACTCTCTGGAACACACCATAGCTAACTTAACACAGAGACACTAGGCACACGAGGGCTGCCGGAGCACCATCAGTTCACCGGCACGGCCGGATCTA
GGCCTTGGTGGCCTTCTTGGGGGACTTGGTGGTCTTCTTGGGCGACTTGGGGGCGGCGCCGGCCTTCTCAGCCTTCTCAGCGGCCTTCTTGGGGAGCAGC
ACCGGGTTGATGTTGGGGATCACGCCGCCGTGGGCGATGGTGACGCCGCTCAGCAGCCTCCCGAGCTCCTGGTACTCGAGGACGGCGGCGAGGTACTCGA
GGACGGCGGCGAGGTAGACGGGGGCGCCGGAGCCGACGCGCTGGGCGTAGCGGCCCTTCTTGAGGAAGCGCCCAATGCGGCCGACGGGGAACTGGAGGCC
GGCCTTGACGGACCTGGTCACCGACTTCTTCCTCGGCCCGCCGAACTTCTTCCCGGCCACCTTCTTCAGCTTGCTGGCGTCCATCTTCCTGGCTTGCTCG
CTCCTTGCTGGGACTCCGGCGAGAGGTGGATTCGGTGGGGTTGGTTGATG