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Detailed information on CNT30435258


BLAST search results

BLAST vs Swiss-Prot:
sp|P20143|PSAH_HORVU, E-value = 1e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693708Aegilops tauschiiOryza sativa65.8534.1286.1187forward
CNT30672419Aegilops tauschiiSetaria viridis52.8238.5683.33150forward
CNT30285918Aegilops tauschiiTriticum aestivum53.8732.5599.35153forward
CNT30240454Aegilops tauschiiAvena sativa79.2363.9292.44225forward
CNT30656050Aegilops tauschiiTriticum dicoccoides98.9445.7797.86281forward
CNT30130278Aegilops tauschiiLolium perenne98.9432.0492.17281forward
CNT30679870Aegilops tauschiiTriticum urartu98.9439.0897.86281forward
CNT30338878Aegilops tauschiiEragrostis tef55.2820.1384.71157forward
CNT30368187Aegilops tauschiiSorghum bicolor24.328.1688.4169forward
CNT30101676Aegilops tauschiiOryza rufipogon54.9336.7986.54156forward
CNT30576447Aegilops tauschiiOryza barthii23.242287.8866forward
CNT30116867Aegilops tauschiiOryza nivara31.3436.9388.7689forward

Expression of CNT30435258

Peptides detected in this lncRNA

>peptide 1 (93 aa)
DLDLAAWSRGGRQLGPLLDGEQVGGGGGADVGEQRAAAEQQHLEQQPPLGEGRGEGVEELALQAVVGRRRVAAVQVEVDALLPVLGHHRRPASP

Sequence

>CNT30435258
GATTTAGATCTTGCCGCGTGGTCCCGGGGTGGGCGGCAGCTGGGGCCCCTTCTTGATGGGGAGCAGGTCGGGGGAGGCGGTGGCGCTGACGTAGGCGAGC
AGCGAGCCGCCGCCGAGCAGCAGCACCTTGAGCAGCAGCCCCCGCTTGGTGAAGGGCGCGGCGAAGGTGTTGAAGAACTTGCTCTGCAGGCCGTTGTAGG
GCGACGCCGCGTCGCTGCCGTACAGGTCGAAGTAGACGCTCTTCTCCCCGTACTTGGCCACCACCGCCGCCCCGCGAGCCCTGC