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Detailed information on CNT30435125


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30219730Aegilops tauschiiHordeum vulgare48.7130.2488.66397forward
CNT30385027Aegilops tauschiiTriticum turgidum78.5343.4894.22640forward
CNT30474047Aegilops tauschiiSaccharum spontaneum18.1627.2183.78148reverse complement
CNT30352118Aegilops tauschiiEragrostis tef18.0422.6985.03147forward

Expression of CNT30435125

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MGKVCCSSESEEEAGFSFLGLLVAAVIALVFMLLCTPPKRRCVTIYPCC*

Sequence

>CNT30435125
CGTCAGTGGCCTGGGTGGGTGCGAGCATAGGCTGAGCTGTCTTCAGAGACGGAAGGGGAGCACAGGAGGGTGGCATCATTGAAGACCTGATAGTGACGCC
CCAACAAACTGGCCACACCACGGCGATCATGGCCGTGGTGGTATAAGAAAGAACGAAACGTACCACTGCTAGGAAGCAAGCCTCACTTCTTCGTCTGACC
ACCACTGATCATTAGCGTAGGCAGCACCGGGAAGCAACCTCTCTGCTCAGGCTAGCATGGGGAAGGTGTGCTGCAGCAGCGAGTCGGAGGAGGAGGCGGG
CTTCAGCTTCCTGGGGCTCCTCGTCGCGGCCGTCATCGCCTTGGTGTTCATGCTCCTCTGTACCCCGCCGAAGCGGCGCTGCGTCACCATCTACCCGTGC
TGTTGAGGCTGAGGAGTCTCCAAGGATCTCTGGTTGCTGGGAGGAACGTTCTGTTGTTCATGGGAGGGAGCAGGCCAGGCAATGGTCCCTGGTTTTCTTC
GGTTCAGAAAATAATTTCTACTACTGAATTGTAGGACTCGTCGAAACTGTAAGCCATGTTTATCGGTATATTAGGCTGTCCATCTCTATCTGTACCATGA
ACTGATACATCTGGGGAAAATAGATATCATCAGACTTGTTATGTTGTTTTCACTTGTCCTGCTCCCTTCTCTCTTTCTTTTCTCTGTTTGTTTTTTGTTT
TCTCTTTCAGATTTTTGATACGATCGTAACAGAAAAGCCAAGAAGCTTGGCTATCTGCTAGCACTGCCAGGATGCAATTAAATAACAGAAAAGTTCAGTG
ATATTTTGTTGGTGA