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Detailed information on CNT30435114


BLAST search results

BLAST vs Swiss-Prot:
sp|P05621|H2B2_WHEAT, E-value = 5e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554669Aegilops tauschiiOryza glaberrima31.0534.3393.85195forward
CNT30103076Aegilops tauschiiOryza rufipogon31.0532.3493.85195forward

Expression of CNT30435114

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MVGFLLYLASLADSPASFSKMSLMKEFMMDMALEEMPMSGCTCFSTLKM*

Sequence

>CNT30435114
GAAATTCAGCAAAAGCACTACTACTTGAAACAATAACATTCAGATAGATTAGCAACTTCAGTTCTCACAACCAACTAGCCAACGAAGCGTTGGCGCACAG
ACGACCACTCCTACCACTACTTGCAGATACATAAGCAGAGTCAGCGACCACTAACAGGAGACAACAGCAGCCAACTACATCTGTCGCATCAACAGTCTAG
GAGGAGGTGAACTTGGTGATGGTGGGCTTCTTGTTGTACCTCGCGAGCTTGGCCGACTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA
TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTTGAAGATGTAGATCTTGTACGTCTCCACGCCCTTCTTGGCCTT
GCTGCCCTTCTTCCTGCCCCGGGTCTTGGCCTCGCCGCCGGCCTCCTTGGACGCCGTCTTGCCCGCCGGCAGCCGCTTCTCGGCCTTGGGCTTCTTGCCC
GCGGGGGTCTTCTCCGCCGCCTTCTCGACCTTGTTCTCGGCCGCCGGCTTCTTGTCTGCCTTGGGGGCCATGGCTGCCGCTGGAGCTTCGGAGGTGGGGA
GTGAGGGAGAGGTGGGAGTGAGGAGGTG