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Detailed information on CNT30435028


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693623Aegilops tauschiiOryza sativa28.6211.8792.1389forward
CNT30673532Aegilops tauschiiSetaria viridis24.1219.048875forward
CNT30285390Aegilops tauschiiTriticum aestivum71.0659.7396.83221forward
CNT30383171Aegilops tauschiiTriticum turgidum72.6739.395.58226forward
CNT30655869Aegilops tauschiiTriticum dicoccoides72.6772.4495.58226forward
CNT30367620Aegilops tauschiiSorghum bicolor22.5118.1887.1470forward

Expression of CNT30435028

Peptides detected in this lncRNA

>peptide 1 (30 aa)
EHIDRGDPSDQMRSMVHKHEARRGKKKDGI*

>peptide 2 (55 aa)
MGSRSGEAGRTASLRPEMELPARPLTATGWTATSDAIAVELCVYSGRVLVLELRGT

Sequence

>CNT30435028
GAACACATAGATAGGGGAGATCCATCAGATCAGATGAGATCCATGGTACACAAGCACGAGGCGAGACGAGGGAAGAAGAAGGATGGGATTTAGATCTTGC
CGCGTGGTCCCGGGGTGGGCGGCAGCTGGGGCCCCTTCTTGATGGGGAGCAGGTCGGGGGAGGCGGGCCGGACGGCGAGCTTGCGGCCGGAGATGGAGCT
GCCGGCCAGGCCCCTCACGGCGACCGGCTGGACGGCGACGAGCGACGCCATTGCGGTCGAGCTGTGCGTATACAGTGGGCGTGTCCTGGTTCTGGAGCTG
CGGGGTACGTG