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Detailed information on CNT30434820


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533086Aegilops tauschiiEucalyptus grandis54.6212.0386.07201forward
CNT30226090Aegilops tauschiiHordeum vulgare10036.5199.18368forward
CNT30689542Aegilops tauschiiTriticum urartu10022.2699.46368forward
CNT30103343Aegilops tauschiiOryza rufipogon10049.3397.83368forward

Expression of CNT30434820

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MPESQHQGLTQIERRRPLRDIVPILVLNYRRLVS*

Sequence

>CNT30434820
TCGTTAGTTAAGCCACCTTTTTCTAAGAAGGATTTTTGTAATTCAGGATTAATAGTACTTAGAATGGCTTTTTCATATTGAGAAATTCTGTCTAGTGGCA
TTCGATCACAGAAGCCGTTGACAGCAGCATAAATCACAACAATTTGTTTTTCAATTGGAAGTGGTTCATATTGTGGTTGTTTGGGCACTTCTGTAAGCCT
TGCACCTCTATTGAGTAATGCCTGAGTCGCAGCATCAAGGTCTGACCCAAATTGAGCGAAGGCGGCCACTTCGCGATATTGTGCCAATTCTAGTTTTGAA
CTACCGCAGACTTGTTTCATAGCTTTCAACTGAGCGGCAGACCCGACGCGACTGACGGATAAGCCAAC