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Detailed information on CNT30434789


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30194088Aegilops tauschiiSecale cereale47.2717.6498.84173reverse complement
CNT30220663Aegilops tauschiiHordeum vulgare73.538.6599.63269forward
CNT30397046Aegilops tauschiiTriticum turgidum48.0954.1599.43176forward

Expression of CNT30434789

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MGTLAPTRGGKQGRDQGAGPRRVFPSLLVIVFVRDARFTK*

Sequence

>CNT30434789
ATTTCACTGCAGGCAGCGTAGCAATTCTCGCGGGAATCTCGGTGTTGTTTGGGCCGATTCCTTAACGAGAGCCTAGTCGAAAGCGCCCATAAAAAGAGTA
AATCGTTTTCGGTATGGGTACGCTGGCCCCTACGAGGGGCGGTAAGCAAGGTAGAGACCAGGGAGCAGGACCGCGAAGGGTCTTCCCATCTCTTCTTGTT
ATTGTCTTTGTCCGAGATGCCCGGTTCACCAAATGATAATTCAAATCGAGATTGTGTGAAGTAAAGATCTTTTTCTTGAAAGCGGATTTCTCCCTTCAAA
ATATCATCCATCTAATTTGTTAAAGTATGGAATTCTCACCCAGAGCTGCGGAACTCACGACTCTAT