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Detailed information on CNT30434643


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT002726, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671914Papaver somniferumSetaria viridis83.237.2293.05619forward
CNT30619000Papaver somniferumSesamum indicum99.624.2694.6741forward
CNT30730480Papaver somniferumCorchorus capsularis101.7560.4694.45757reverse complement
CNT30490123Papaver somniferumOlea europaea62.3726.6595.47464forward
CNT30505430Papaver somniferumNicotiana attenuata100.943294.67751forward
CNT30712870Papaver somniferumGlycine max49.8722.3295.42371forward
CNT30157615Papaver somniferumPistacia vera51.0851.7793.16380forward
CNT30300122Papaver somniferumTriticum aestivum101.0834.8693.22752forward
CNT30221603Papaver somniferumHordeum vulgare100.9462.3292.54751forward
CNT30592527Papaver somniferumMusa acuminata25.456.5997.35189forward
CNT30543268Papaver somniferumBrassica napus101.7532.9893.66757forward
CNT30511493Papaver somniferumSolanum lycopersicum38.3131.8895.09285reverse complement
CNT30435868Papaver somniferumAegilops tauschii100.5453.6693.18748forward
CNT30670388Papaver somniferumTriticum dicoccoides101.0826.8292.95752forward
CNT3082633Papaver somniferumBrassica juncea42.3495.7492.06315forward
CNT30140120Papaver somniferumLolium perenne101.0822.6493.35752forward
CNT30605266Papaver somniferumGossypium raimondii56.0519.9295.44417forward
CNT30207637Papaver somniferumHelianthus annuus100.9438.3993.21751forward
CNT30689147Papaver somniferumTriticum urartu101.0856.892.02752forward
CNT30363124Papaver somniferumSorghum bicolor30.5110085.02227forward
CNT30595572Papaver somniferumOryza meridionalis35.2230.5793.51262forward
CNT30360996Papaver somniferumLactuca sativa100.9451.4794.54751forward
CNT3057903Papaver somniferumAmborella trichopoda100.6731.2691.05749reverse complement
CNT30108930Papaver somniferumOryza longistaminata101.0832.1493.35752forward
CNT3038420Papaver somniferumCucumis melo83.243.3593.7619forward
CNT30331546Papaver somniferumDioscorea rotundata12.522.392.4793reverse complement
CNT30577866Papaver somniferumOryza barthii28.3612.9594.79211reverse complement
CNT30550626Papaver somniferumOryza brachyantha39.3810087.03293reverse complement
CNT30113381Papaver somniferumFicus carica20.5634.390.85153reverse complement

Expression of CNT30434643

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MTIRRWAWKHPSFEESVITHWSSSMAPKMYRGSSDSPKRRDIESSVSSGTFCQSGKVFGDKTWRYQK*

>peptide 2 (30 aa)
MKSMARGRALIGLGWPQFALPTPGKLRIRA*

Sequence

>CNT30434643
AGAGCAGCTTAAGCTATTAGGTGTAGGCGCTTTCCAGAGGTTAATTTTCTAGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTG
AAGAGAGCCCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAATCAAGATCGGATAT
AGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGAAGTCGATGGCCCGAGGTAGAGCACTCATTGGGCTAGGGTGGCCACAATTTGCCTTACCAA
CCCCGGGGAAACTCCGAATACGGGCCTAGATCGTTTGTACAGACAGACTTTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCTAATTGTACGCTA
AGGTCCCCAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCTATGACAATCAGGAGGTGGGCTTGGAAGCATCCATCCTTTGAAGAAAGCGTAATAAC
TCACTGGTCTAGCTCCATGGCACCGAAAATGTATCGGGGCTCAAGTGATTCACCGAAGCGACGAGACATTGAATCAAGTGTCAGTAGCGGGACGTTCTGT
CAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACAAGATCGCCTGCCA
GTTGAAGGTTTTCTGCGTTCAGTGAATCTACGCAGAGTGAATCG