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Detailed information on CNT30434619


BLAST search results

BLAST vs Swiss-Prot:
sp|A6MM72|RR8_BUXMI, E-value = 9e-55

BLAST vs NONCODE:
NONMEST004486, E-value = 8e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641762Papaver somniferumNymphaea colorata41.798.0792.14280forward
CNT30550215Papaver somniferumIpomoea triloba40.95.9886.5274forward
CNT30541469Papaver somniferumBrassica napus25.6711.2487.79172forward
CNT30553279Papaver somniferumOryza glaberrima25.5215.9285.96171forward
CNT30147499Papaver somniferumMedicago truncatula22.549.5887.42151forward
CNT30310337Papaver somniferumCamelina sativa24.189.6988.89162forward
CNT30202977Papaver somniferumHelianthus annuus21.0426.793.62141forward
CNT30351320Papaver somniferumEragrostis tef18.3650.4184.55123forward
CNT3059026Papaver somniferumAmborella trichopoda94.1843.9786.53631forward
CNT30576477Papaver somniferumOryza barthii25.5237.2585.96171forward

Expression of CNT30434619

Peptides detected in this lncRNA

>peptide 1 (31 aa)
LELYPHKNNVEKKHLIVQIFIAESINYTSPC*

Sequence

>CNT30434619
CCTCGAGTTGTATCCCCACAAAAATAATGTCGAAAAAAAACACCTAATCGTTCAAATCTTTATTGCGGAGTCTATAAATTATACGTCCCCTTGTTGAATC
ATAACGACTTACTTCGATTTTGACTTTATCTCCTGGTAGTATCCGTATAAAACTACGTCGGATCCTTCCTGAAACATAACCTAGAATCAGATCTTCATTA
TCTAAGCGAACCCGGAACATGCCATTGGGAAGTGATTCAGTAATTAAACCTTCATGAATCCATTTTTGTTCTTTCATTTCAGGTAACCCCCTTGAAGTAT
CAACTAATGGAGGAGGAGTGATATTAGGCAACCAGTCCTTCCTCTTTTTCTTTTTTTCACAATATAGGAAGTTACCAATTCAATTCAGATATCAGAAAGA
TCACCATATATAACACAAAATTTCTCCTCCGATTCCTTCTAGCCGAGCTTCTCGGTCTGTCATTATACCTCGAGAAGTAGAAAGAATAACAATACCCATT
CCTCCTAAAATCCTAGGAATTCGTTGAGAGTTGGAATAGATTCGTAGACCAGGCCGGCTGATACGTTTTAAAATAGTTCTATATGGCCCTTTCCTATTCC
TTCTATGTCGAAGGGTTAAAACCAAGAAAGTTTTGTTGCTTTCTCGATGTTTTCTCACGTTTTCGATAAA