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Detailed information on CNT30434615


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 3e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3082954Papaver somniferumBrassica juncea33.710.3491.8122forward

Expression of CNT30434615

Peptides detected in this lncRNA

>peptide 1 (66 aa)
PKCVEAQQSTRHLGLKHCFGAGRESGTKSRKTLNTRYDPKIWGQGRPVRRWGISFIVERETARITS*

>peptide 2 (53 aa)
MGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

Sequence

>CNT30434615
CCGAAATGCGTTGAGGCGCAGCAGTCGACTAGACATCTAGGGTTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGAAAACTCTGA
ATACTAGATATGACCCCAAAATATGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA
AGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGTGTAATAGC
TCACTGATCGAGCGCTTTTGCGCCGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGG