Detailed information on CNT30434591


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020986Papaver somniferumCitrullus lanatus50.1913.8985.27129reverse complement
CNT30239987Papaver somniferumAvena sativa22.969.6193.2259reverse complement
CNT3055442Papaver somniferumAmborella trichopoda41.636.883.18107forward

Expression of CNT30434591

Peptides detected in this lncRNA

>peptide 1 (84 aa)
VNLEDTKVYDSTQFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVNGEVQTRKGLRWIPRHPETRKGVASDKMLRGVENKHRSG

>peptide 2 (30 aa)
MIAPNFSDSAVRSMIYHSWTLIRYFHLAAP*

Sequence

>CNT30434591
CGTGAACTTAGAGGATACAAAGGTATATGATAGCACCCAATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATACTT
CCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAACGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGAA
AGGGCGTAGCAAGCGACAAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAG