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Detailed information on CNT30434475


BLAST search results

BLAST vs Swiss-Prot:
sp|P31181|RBL_CAMSI, E-value = 6e-36

BLAST vs NONCODE:
NONMEST005601, E-value = 3e-127

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Papaver somniferumOryza sativa80.996.7389.39311forward
CNT30678101Papaver somniferumSetaria viridis36.4639.7790.71140forward
CNT30536187Papaver somniferumEucalyptus grandis40.112.4885.71154forward
CNT3019929Papaver somniferumCitrullus lanatus84.6474.8893.85325forward
CNT30629265Papaver somniferumVigna unguiculata80.9927.4791311forward
CNT30201084Papaver somniferumPisum sativum82.2914.3989.56316forward
CNT30179476Papaver somniferumSecale cereale79.9533.3388.6307forward
CNT30290805Papaver somniferumTriticum aestivum79.9517.2488.6307forward
CNT30225846Papaver somniferumHordeum vulgare44.7915.1787.21172forward
CNT30565170Papaver somniferumActinidia chinensis94.2731.793.92362forward
CNT30539441Papaver somniferumBrassica napus68.755.493.56264forward
CNT30237533Papaver somniferumBrassica oleracea68.7517.9293.56264forward
CNT30554212Papaver somniferumOryza glaberrima80.998.2489.39311forward
CNT30146680Papaver somniferumMedicago truncatula80.7324.7489.03310forward
CNT30435662Papaver somniferumAegilops tauschii47.457.0589.01182forward
CNT30258658Papaver somniferumAvena sativa78.9142.0289.44303forward
CNT3060115Papaver somniferumArabidopsis lyrata68.7511.1394.32264forward
CNT30598584Papaver somniferumFraxinus excelsior36.4626.6786.43140forward
CNT3017995Papaver somniferumZea mays80.9920.1389.39311forward
CNT30683050Papaver somniferumTriticum urartu69.5319.5789.89267forward
CNT30356508Papaver somniferumLactuca sativa100.7855.3691.99387forward
CNT30480921Papaver somniferumChara braunii46.8823.6883.33180forward
CNT30323473Papaver somniferumAsparagus officinalis33.5916.3587.6129forward
CNT30121217Papaver somniferumCitrus clementina86.4637.0190.96332forward

Expression of CNT30434475

Peptides detected in this lncRNA

>peptide 1 (74 aa)
AGKSNGPHSCPCTSRRFGIYRGPCFLRWNSRLRSNSECCQDISILGFIVRSIISQFVIFNTSFESNTCFSLCLW*

>peptide 2 (31 aa)
LVSPTVHTVVHVPVEDSASTAAPASSGGTPG*

Sequence

>CNT30434475
GGCTGGTAAGTCCAACGGTCCACACAGTTGTCCATGTACCAGTAGAAGATTCGGCATCTACCGCGGCCCCTGCTTCCTCAGGTGGAACTCCAGGTTGAGG
AGTAACTCGGAATGCTGCCAAGATATCAGTATCCTTGGTTTCATAGTCAGGAGTATAATAAGTCAATTTGTAATCTTTAACACCAGCTTTGAATCCAACA
CCTGCTTTAGTCTCTGTTTGTGGTGACATAATCCCTCCCTACAACGCATGAATTAAGAATTCTCACAACGACAAGGTCTACTCGACATGAATTAGCCGTT
AATGAAACCTTTAACAGGAATCTTTCACAAAACTCTCAACAAATATTATCAACTAATCAGAATGGTTGGTTGTTAGACCACGGT