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Detailed information on CNT30434187


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553919Papaver somniferumOryza glaberrima19.9420.9782.4125reverse complement
CNT30643677Papaver somniferumCannabis sativa17.5422.1381.82110reverse complement
CNT30101726Papaver somniferumOryza rufipogon19.9421.8982.4125reverse complement
CNT30576293Papaver somniferumOryza barthii19.9423.9582.4125reverse complement

Expression of CNT30434187

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MSTFLKFNTLGPKTKNFVVAGGLTSFVFGVYFYTMRAVGGTDELQVAIDKFEDLKTSNETAESTSLPKS*

Sequence

>CNT30434187
AACATCGCTTGGTTTTATTTTTCCAGTAATAAAACAGAGAGTCTCTAGAAAAAGGAGGATTTAGGGTTTTTGAATTTGTCTGGAATCAATCAGAGACGCA
AACAAATTTCAGGATGTCTACTTTCTTAAAATTCAACACACTTGGGCCCAAAACAAAGAACTTTGTCGTAGCTGGAGGACTGACAAGTTTCGTATTTGGA
GTGTATTTCTACACAATGAGAGCTGTTGGAGGCACCGATGAGCTTCAGGTAGCTATCGATAAGTTCGAAGATCTGAAAACTAGTAATGAGACAGCAGAAT
CAACTAGCCTACCAAAGTCTTGAGCGTCTCGTCCCCCCTTTGTCATCCTTCTAGTCTCTTTTTGTTGATAAATGATGTTGCTCAAATGACAGATGATACT
GAAGTCCAGGAAAACCTTTTGAGTCGTTTCGTTGAATAACAGTTTTTTGGAACAATGATGTTTCTTGTAAAAAGTACTGGTTACTCATGATACAGTGTTT
CTTTGTCATAGAGAATTTTAGAATCTTATTCCATGCTGGTTTTTACTTATTATGAGATCTGAATTTCATTTGGTTCTGTTCCGAGACTTTTTACTATAAA
TTTCTTTTAATTATGGGAGCTTTAAAC