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Detailed information on CNT30434135


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628227Papaver somniferumDaucus carota81.8899.3395.62890forward

Expression of CNT30434135

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MAHLELSIPWRGSMEQPRRPTYLKFENRSRALRPRCL*

>peptide 2 (54 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRRLRPASRPRFRSHRRALLLIGA*

>peptide 3 (43 aa)
MLSLEPFTEDLGRSAVQPTRGSRQSASLRLTGFNRPWTRTHVRL

Sequence

>CNT30434135
TCCGGCTGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTGGGCAGGCCGTTAAACAGAAAAGATAACTCTTTCCGAGGCCCCCGCCGACGTCTCCG
GACTCCCTAACGTTGCCGTCAGCCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGAATTCGCGTGTTGCACGCTCTCTGACGGGCTTCCC
CCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACC
ACCAAGATCTGCACCGACGGAGGCTCCGCCCGGCCTCACGGCCTAGGTTTCGCAGCCACCGCCGCGCCCTCCTACTCATCGGGGCCTAACGATTGCCCCG
ACGGCCGGGTGTGGGTCACGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCC
ATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCAT
CGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGCGCGGCTCAATGGAGCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAGA
ATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCCCGCGGGCTCCAGCTATCCTGAGGGAAACTTCGGAGGG
AACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGAGCCTCCACCAGAGTTTCC
TCTGGCTTTGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGTATGCTCTCACTCGAACCCTTCACAGAAGATCTAGGTCGGTCGGCGGT
GCAACCCACAAGGGGATCCCGCCAGTCAGCTTCCTTGCGCCTTACGGGTTTTAATCGCCCGTGGACTCGCACACATGTCAGACTCCT