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Detailed information on CNT30434077


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550281Papaver somniferumIpomoea triloba99.6482.2795.941109reverse complement
CNT30519480Papaver somniferumJuglans regia98.8373.2495.821100forward
CNT30617948Papaver somniferumSesamum indicum96.7783.0495.081077reverse complement
CNT30730404Papaver somniferumCorchorus capsularis99.3776.0794.391106forward
CNT30401084Papaver somniferumTriticum turgidum51.9394.9196.37578forward
CNT30459617Papaver somniferumSaccharum spontaneum57.14100.3295.13636forward
CNT30126186Papaver somniferumCorymbia citriodora63.9791.9994.1712reverse complement
CNT30679693Papaver somniferumTriticum urartu90.8499.3195.451011forward
CNT30497572Papaver somniferumDigitaria exilis71.1693.496.59792forward
CNT3049178Papaver somniferumCucumis sativus74.396.2795.28827reverse complement

Expression of CNT30434077

Peptides detected in this lncRNA

>peptide 1 (61 aa)
VVSPFYRRCVPSLNWPGRASGAVTLKKLECSKQAQALDTLAWDNIIGFRSYCVGLRDRSND*

>peptide 2 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESSGLEDDQIPS*

>peptide 3 (47 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEDSLRGQLLRGTMAV*

>peptide 4 (33 aa)
MPTMDRRMLLLGLRRHLMRNQSFWVPGGVWSQG*

Sequence

>CNT30434077
GTCGTCTCTCCCTTCTACCGGCGATGCGTTCCTAGCCTTAATTGGCCGGGTCGTGCCTCCGGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAG
CCCAAGCTCTGGATACATTAGCATGGGATAACATCATAGGATTTCGGTCCTATTGCGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGG
GGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGA
AAGTTCGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCATGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCAC
CTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGAACCACCAGGAGTCCAGACATA
GTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAAC
GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGATTCCCTCCGCGGCCAGCTTCTTAGAGGGACTATGGCCGTTTAGGCCACGGAATTTGAGGCAA
TAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTT
TTTAAAGTGCATCGTGATCGGGCTAGATCATTGCAATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCC
TGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGCTGGCGGTTCGCCGCCGGTGACGTCGCG
AGAAGTCCACTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCCAGCAG
AACGACCCGCGAA