Detailed information on CNT30434075


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318007Papaver somniferumCorylus avellana98.5175.6594.142644reverse complement
CNT3021659Papaver somniferumCitrullus lanatus98.462.0793.752641forward
CNT30730396Papaver somniferumCorchorus capsularis59.72100.593.71603forward
CNT3072442Papaver somniferumQuercus suber64.6810091.241736forward
CNT3047192Papaver somniferumPrunus dulcis60.8448.1192.531633forward
CNT30544747Papaver somniferumBrassica napus94.2698.7992.252530reverse complement
CNT30234560Papaver somniferumBrassica oleracea63.4989.3692.191704reverse complement
CNT30312195Papaver somniferumCamelina sativa63.968.7792.651715reverse complement
CNT30262562Papaver somniferumBrassica rapa88.3492.9492.452371reverse complement

Expression of CNT30434075

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MCPGQMRNGDEPVRRSTRGADRRGLRRRPKPGL*

>peptide 2 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLWEMT*

>peptide 3 (32 aa)
MQPKAGGKFRPRLNTGERPIANKYREGKMKRL*

>peptide 4 (40 aa)
MNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 5 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 6 (85 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGPSPEPVGCRRTARAAHAARAGRRVPAGGRIGNGSSRGLPRASNSRLRTGTDKGNPTV*

>peptide 7 (43 aa)
MAPTLRPQVKRDYPLNLSISISGGEETYKDSPSNGERTGNSPA*

Sequence

>CNT30434075
TGTGCTTACCGTGAAGGACCATAAGGAACCCATCGGGCCATAAATATGGCACCCACTCTGCGACCCCAGGTCAAGCGGGACTACCCGCTGAATTTAAGCA
TATCAATAAGCGGAGGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCTTGAGAATCGGACGGCACCGCTGTCCG
AATTGTAGTCTGTAGAAGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGAGAGGGTGAGAGCCCCGTCGTGCTCGGACCCTGT
CGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGCGAGAGACCGATA
GCGAACAAGTACCGCGAGGGAAAGATGAAAAGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTTTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTG
CCCCGGTCAGATGCGGAACGGTGATGAGCCGGTCCGCCGATCGACTCGGGGTGCGGACCGACGCGGATTGAGGCGGCGTCCCAAGCCCGGGCTGTAGTCA
TGCCCGCGGAGACGTCGTCGCCTTGATCGTGGTGGGCAGCACGCGCCTCACGGCGTGCCTCCGGCAACAGCGTGCTCCCGGCGTCGGCCTGTGGGTTCCC
CATTCGGCCCGTCTTGAAACACGAACCAAGGAGTCTGACATGTGTGCGAGTCCACGGGCGAGTAAAACCCGTAAGGCGCAAGGAAGCTGACTGGCGGGAT
CCCCTTGTGGGTTGCACCGCCGACCGACCTAGATCTTCTGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAG
CGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACC
GTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGCGGGCGAGTTCTATCGGGTAAATCCAATGATTAGAGGCATCGGGGGCGCA
ACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTCCAATGAGCCGCGCCACGGAATCGAGAGCTCCAATGGGCCATTTTTGGT
AAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGC
AGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGAC
CAACACCCGGCCGTCGGGGCAATCGTTAGGCCCCGATGAGTAGGAGGGCGCGGCGGTGGCTGCGAAACCTAGGCCGTGAGGCCGGGCGGAGCCTCCGTCG
GTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCG
ATCCTAAGAGACGGGGGAAGCCCGTCAGAGAGCGTGCAACACGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGG
CAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGAAAGAGTTATCTTTTCTGTTTAACGGCCTGCCCACCCTGGAAACGGTTCAGCCGGAGGTAG
GGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATCCACGCCCGGACC
GCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCT
GAGGGCTGGGCACGAGGTCCCAGTCCCGAACCCGTCGGCTGTCGGCGAACTGCTCGAGCTGCTCACGCGGCGAGAGCGGGTCGTCGCGTGCCGGCCGGGG
GACGGATTGGGAACGGCTCCTCACGGGGCCTTCCGCGTGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACA
AAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGC
GGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTA
TCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGGGAAATGACTTGA
GAGGTGTAGGATAAGTGGGAGCCGTCTTTGGCGGCGAAGGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGGCGGAAGCGGGGCATCG
CCCCTCTTTTTAGATCCAAGGCTAGCTTGCTATGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCA