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Detailed information on CNT30433935


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30711221Papaver somniferumGlycine max73.07100.5195.561373forward
CNT30163337Papaver somniferumPistacia vera73.87100.2993.591388forward
CNT30496898Papaver somniferumDigitaria exilis80.6883.891.951516forward
CNT30558388Papaver somniferumPanicum hallii70.0994.8294.461317forward

Expression of CNT30433935

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MPRHLISDAHEWINEIPTVHVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 2 (85 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGPSPEPVGCRRTARAAHAARAGRRVPAGGRIGNGSSRGLPRASNSRLRTGTDKGNPTV*

>peptide 3 (34 aa)
MNGLTRFPLSMSTIQRNHSQGNGLGRISGERRPC*

Sequence

>CNT30433935
CCCGGCCGTCGGGGCAATCGTTAGGCCCCGATGAGTAGGAGGGCGCGGCGGTGGCTGCGAAACCTAGGCCGTGAGGCCGGGCGGAGCCTCTGTCGGTGCA
GATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCT
AAGAGACGGGGGAAGCCCGTCAGAGAGCGTGCAACACGCGAACTTCGAAAGGGAATCGAGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACG
TTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGAAAGAGTTATCTTTTCTGTTTAACGGCCTGCCCACCCTGGAAACGGTTCAGCCGGAGGTAGGGTCC
AGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCACCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATCCACGCCCGGTCGTACTC
ATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATT
GGCTCTGAGGGCTGGGCACGAGGTCCCAGTCCCGAACCCGTCGGCTGTCGGCGAACTGCTCGAGCTGCTCACGCGGCGAGAGCGGGTCGTCGCGTGCCGG
CCGGGGGACGGATTGGGAACGGCTCCTCACGGGGCCTTCCGCGTGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATT
AAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTA
AACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCATGT
CTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATG
ACTTGAGAGGTGTAGGATAAGTGGGAGCCGTCTTTGGCGGCGAAGGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGGCGGAAGCGGG
GCATCACCCCTCTTTTTAGATCCAAGGCTAGCTTGCTATGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAA
AAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATA
CGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCC
AAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATA
GGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGCCGCGATAGTAATTCAACCTAGTACGAGAGGAACCGT
TGATTCACACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCAGGATTATGACTGAACGCCTCTAAGTCAGAATCCAGGC
TAAAGAAGCGGCGCATGCGCCCGTCGCCCGATTGTCGACCTGCAGTAGGGACCTTCGGGTCCCCAGAGGCACCTGCAGT