Detailed information on CNT30433931


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730400Papaver somniferumCorchorus capsularis60.398.6494.571308reverse complement
CNT30574469Papaver somniferumVitis vinifera66.4878.6794.521442forward

Expression of CNT30433931

Peptides detected in this lncRNA

>peptide 1 (29 aa)
AEPPSVQILVVVANIQMRTLKAEEGKGSM*

>peptide 2 (35 aa)
MRPSPDCRPAVGTFGSPEARAVGGALAADELRGPP*

>peptide 3 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 4 (40 aa)
MGYLVGADLGGISKYSNENFEGRRGERFHVNGTCTWVSRS*

>peptide 5 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 6 (64 aa)
GGASVGADLGGSSKYSNENFEGRRGERFHVNGTCTWVTSSVQILVVLANIQMRTLKAEEGKGSM*

>peptide 7 (86 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWHEVPVPNPSAVGELLELLTRRERVVACRPGDGLGTAPHGAFRVRRTVDSELVRTRGIRLFN*

Sequence

>CNT30433931
GGCGGAGCCTCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTT
GCACATGGGTTACCTCGTCGGTGCAGATCTTGGTGGTATTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGC
ACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCCGTCAGAGAGCGTGCAACACGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAAC
CGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGTAAAGAGTTATCTTTTCTGTTTAACGGCCTGCCCACCCTGGA
AACGGTTCAGCCGGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGA
TGCCATCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGG
ATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGCACGAGGTCCCAGTCCCGAACCCGTCGGCTGTCGGCGAACTGCTCGAGCTGCTCACGCGGC
GAGAGCGGGTCGTCGCGTGCCGGCCGGGGGACGGATTGGGAACGGCTCCTCACGGGGCCTTCCGCGTGCGTCGAACAGTCGACTCAGAACTGGTACGGAC
AAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGA
AGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATT
AACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGA
CTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGTCTTTGGCGGCGAAGGTGAAATACCACTACTTTTAACGTTATTTTAC
TTATTCCGTGAGGCGGAAGCGGGGCATCGCCCCTCTTTTTAGATCCAAGGCTAGCTTGCTATGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTT
GGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTT
GATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACA
GGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCTATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGT
GTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGCCGCGATAGTAATT
CAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCAGGATTATGACTGAA
CGCCTCTAAGTCAGAATCCAGGCTAAAGAAGCGGCGCATGCGCCCGTCGCCCGATTGCCGACCTGCAGTAGGGACCTTCGGGTCCCCAGAGGCACGTGCC
GTGGGCGGAGCCCTCGCAGCGGACGAGCTGCGCGGGCCGCCCTGAAGTACTATTACCACCGGGTGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGC
GACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCCATGTCGCACCGATTCGTCCCTCCCCTCCAATCTTCACTCC
AAAAATAAACACTCTGAAGAAATAAAAAAAAGTCCCATAAGCCAAAAACAAATCCATTATTAACTTTTA