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Detailed information on CNT30433917


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639835Papaver somniferumNymphaea colorata94.2876.8193.232570reverse complement
CNT30531232Papaver somniferumEucalyptus grandis96.0777.3394.582619forward
CNT30519180Papaver somniferumJuglans regia100.0782.4995.012728forward
CNT30619309Papaver somniferumSesamum indicum65.1980.8893.751777reverse complement
CNT3021656Papaver somniferumCitrullus lanatus98.7944.4895.172693forward
CNT30730441Papaver somniferumCorchorus capsularis51.47100.2195.011403forward
CNT30632327Papaver somniferumVigna unguiculata95.9381.5194.762615forward
CNT30195048Papaver somniferumPisum sativum95.9369.5394.572615forward
CNT30508033Papaver somniferumNicotiana attenuata92.2675.5393.842515forward
CNT30711135Papaver somniferumGlycine max77.8166.7694.862121forward
CNT3047210Papaver somniferumPrunus dulcis93.6279.3393.612552forward
CNT3076930Papaver somniferumBrassica juncea96.1576.2893.592621forward
CNT3035495Papaver somniferumCucumis melo96.4449.9195.092629forward
CNT30583181Papaver somniferumEchinochloa crusgalli86.21100.2692.982350forward
CNT30335982Papaver somniferumCynara cardunculus94.8378.7689.092585reverse complement

Expression of CNT30433917

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGPSPEPVGCRRTARAAHAARAGRRVPAWGRIGNGSSRGLPRASNSRLRTGTDKGNPTV*

>peptide 2 (86 aa)
STRLTACLRQQRAPGVGLWVPHSARLETRTKESDMCASPRAIKPVRRKEADWRDPLVGCTADRPRSSVKGSSESIPVGTRKMVNYA*

>peptide 3 (41 aa)
ARASRRASGNSVLPASACGFPIRPVLKHGPRSLTCVRVHGR*

>peptide 4 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 5 (40 aa)
MNRKPGYGAQLRANLEPTNGVGRLRQQDGGHGSRNPLRSV*

>peptide 6 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 7 (35 aa)
MRPSPDCRPAVGTFGSPEARAVGGALAADELRGPP*

Sequence

>CNT30433917
CAGCACGCGCCTCACGGCGTGCCTCCGGCAACAGCGTGCTCCCGGCGTCGGCCTGTGGGTTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCT
GACATGTGTGCGAGTCCACGGGCGATAAAACCCGTAAGGCGCAAGGAAGCTGACTGGCGGGATCCCCTTGTGGGTTGCACCGCCGACCGACCTAGATCTT
CTGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGTGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC
AGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGA
TAGCTGGAGCCCGCGGGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGG
ACGGCGCGGCTGCTCCAATGAGCCGCGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCG
GGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAATGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGA
GTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCCACACCCGGCCGTCGGGGCAATCGTTAGGCCCCGA
TGAGTAGGAGGGCGCGGCGGTGGCTGCGAAACCTAGGCCGTGAGGCCGGGCGGAGCCTCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATG
ATAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCCGTCAGAGAGCGTG
CAACACGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCT
CGGAAAGAGTTATCTTTTCTGTTTAACGGCCTGCCCACCCTGGAAACGGTTCAGCCGGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGG
TGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGC
CTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGAGGTCCCAGTC
CCGAACCCGTCGGCTGTCGGCGAACTGCTCGAGCTGCTCACGCGGCGAGAGCGGGTCGTCGCGTGCCGGCCTGGGGACGGATTGGGAACGGCTCCTCACG
GGGCCTTCCGCGTGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGAT
ACTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGG
TAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAA
CGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGT
CTTTGGCGGCGAAGGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGGCGGAAGCGGGGCATCGCCCCTCTTTTTAGATCCAAGGCTAG
CTTGCTATGCCGATCCGGGCGGAAGACATTGTCAGTTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCA
ACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTT
TAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCC
TTCTATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGA
GACAGGTTAGTTTTACCCTACTGATGACAGTGCCGCGATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGTCATCGCGCTTGGTT
GAAAAGCCAGTGGCGCGAAGCTACCGTGTGCAGGATTATGACTGAACGCCTCTAAGTCAGAATCCAGGCTAAAGAAGCGGCGCATGCGCCCGTCGCCCGA
TTGCCGACCTGCAGTAGGGACCTTCGGGTCCCCAGAGGCACGTGCCGTGGGCGGAGCCCTCGCAGCGGACGAGCTGCGCGGGCCGCCCTGAAGTACTATT
ACCACCGGGTGGCGGGTAGAATCCTT