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Detailed information on CNT30433880


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641738Papaver somniferumNymphaea colorata99.6479.1995.181659reverse complement
CNT30550221Papaver somniferumIpomoea triloba94.9594.6795.831581forward

Expression of CNT30433880

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQRNRTEIL*

>peptide 2 (40 aa)
MMLSHANVSRAWACFEHSNFFKVTAPEARPGQLRLGTHRR*

>peptide 3 (34 aa)
MHPFQKSGFVARISSRITTVIRVASTIKQTITDLI

>peptide 4 (65 aa)
LALTRNSSFKTNNCNDLARSRCTLKRLPGPVGQGYILVECISVARVRPRTSKGITDLLLPQTSVA*

>peptide 5 (32 aa)
MKYECPRLSLLIITPIPKANAIGPKSYDVIPC*

>peptide 6 (30 aa)
MMRRQHKGRAIRQVIMNHLSNGQSPRRPFI*

Sequence

>CNT30433880
CTCGCGCTTACTAGGAATTCCTCGTTTAAGACCAACAATTGCAATGATCTAGCCCGATCACGATGCACTTTAAAAAGATTACCCGGGCCTGTCGGCCAAG
GCTATATACTCGTTGAATGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAC
GGCCATAGTCCCTCTAAGAAGCTGGCCGCGGAGGGAATCCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATC
GCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCC
CGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCA
AAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGAT
CGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCT
GACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACGCAATAGGACCGAAATCCTATGATGTTATCCCATGC
TAATGTATCCAGAGCTTGGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCACCGGAGGCACGACCCGGCCAATTAAGGCTAGGAACGCATCGC
CGGTAGAAGGGAGAGACGACCGGTGCACACCCAAAGGGCGGACCGGACGACCCAACCCAAAGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATAT
ACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGA
CTCGAAGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCA
GACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGAAGAGCCCGGTATTGTTATTTATTGTCACTACCTC
CCCGTGTTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTC
ACCCGTCACCACCATAGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCGTGCGATCCGTCA
AGTTATCATGAATCATCTGAGCAACGGGCAAAGCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGC
TCTAGAATTACTACGGTTATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATAAG